Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1202 ATGAGGACGCTGTACAATTCTGGAGGGAACCTTGGAAATGAAGCAGACCCAAGGATGAGAGCGGCCTCAAAAAGGCGTGGAGTTCAGAGAACCTCTATTTCTAGACCAATCCAACCAACTGAGTTCCGGGATTTTGATCTTATTCTTGCTATGGACGAGCAAAGATTTTTTGCAGTAACTGGTTGTCTTGAACAATCTCTTTTGTAA 207 0.4348 MRTLYNSGGNLGNEADPRMRAASKRRGVQRTSISRPIQPTEFRDFDLILAMDEQRFFAVTGCLEQSLL 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1202 68 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 12 56 - -
Lele31g1202 68 SUPERFAMILY Phosphotyrosine protein phosphatases I 10 56 IPR036196 -
Lele31g1202 68 MobiDBLite consensus disorder prediction 1 35 - -
Lele31g1202 68 Pfam Low molecular weight phosphotyrosine protein phosphatase 10 55 IPR023485 -
Lele31g1202 68 Gene3D - 6 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1202 Lele-ChrLele31 18433325 18433761 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1202 12 54 Protein tyrosine phosphatase (PTP) family AT3G44620 69.767 2.33e-17 71.2