Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1200 ATGACAAGCCCGCTAGTGAAGCCGGGCCCACATGAGTTTGCTTGCCGACGCGGGCACAACCCTTGCTCTGTCTCTCACTCACTAGTCGTCTTTGCACAACTCAGGGCAGAGATGAAAGTGATTGCTGCGTATTTGCTGGCAGTGTTGGGAGGGAACACATCCCCTTCCGCTGATGATATAAAGAATATCCTTGGCTCAGTTGGGGCTGAGGCTGATGACGATAGAATTGAGCTTCTCTTAAAGGAAGTTAATGGCAAAGATATTACTGAATTGATTGCTGCTGGAAAAGAGAAGCTGGCTTCAGTTCCAGGCGGGGGAGGTGCAGTTGCTGCTGTTGCTGCACCCGCAGGTGGAGCTGCAGCTGGCGGAGCTGCACCTGCTGCAGAGGCAAAGGAGGAAAAGAAGGTGGAAGAGAAAGAGGAGTCTGATGATGACATGGGTTTCAGCTTATTCGACTAG 459 0.5163 MTSPLVKPGPHEFACRRGHNPCSVSHSLVVFAQLRAEMKVIAAYLLAVLGGNTSPSADDIKNILGSVGAEADDDRIELLLKEVNGKDITELIAAGKEKLASVPGGGGAVAAVAAPAGGAAAGGAAPAAEAKEEKKVEEKEESDDDMGFSLFD 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1200 152 Pfam 60s Acidic ribosomal protein 54 151 - -
Lele31g1200 152 FunFam 60S acidic ribosomal protein P2 35 96 - -
Lele31g1200 152 Gene3D - 37 96 IPR038716 -
Lele31g1200 152 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 38 152 IPR044076 GO:0002182|GO:0003735|GO:0022625
Lele31g1200 152 MobiDBLite consensus disorder prediction 119 152 - -
Lele31g1200 152 CDD Ribosomal_P2 38 152 IPR044076 GO:0002182|GO:0003735|GO:0022625
Lele31g1200 152 MobiDBLite consensus disorder prediction 128 142 - -
Lele31g1200 152 Hamap 50S ribosomal protein L12 [rpl12]. 39 152 IPR027534 GO:0003735|GO:0005840|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1200 Lele-ChrLele31 18423225 18425409 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1200 38 152 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 66.957 3.51e-33 111