Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1191 ATGCCATCAACAACGGCTACGATTCCTGGGGACCTCTCTTCAGCAAGCTCTTCTTCGCCCTTTGGGTCATTCTCTGTATCTACCCATTCCTCAAGGGAGTCATGGGAAAACAAGAAGGCTAGCACCACCTCTCACCCTCCCTCGAGATCGCTACATCTCTCGGCGGGATTGGACCGATTACGATCACAGAAGATGGCGGAAGAACATAGATGCCAAGCTCCGCGCCTCTGCGCCAACAACTGCGGCTTCTTCGGCAGTCCTGCGACGCAGAATCTATGTTCCAAATGCTACAGGGATTTGCAGCTCAAGGAGCAACAGTCCTCTTCGGCCAAGCTGGTTCTCAATCAATCTATAGTCCCTCAGGCGTCGACGGCGGAGAAATGGGAATCATCTTCGTCGTTGCTGGAACCGGTTGAGGATCTTTCGTCTCCCGTTGTTGCTGCGGTTGATCCAGCGCTTCCGGCGGAGGAGCCGAAGAGCGCTTCACCGGCTCAGCCGAATAGGTGCATGACGTGCAGGCGGCGCGTGGGGCTCACGGGGTTCAAGTGCCGGTGCGGGTTGACGTACTGTGGGGCACACCGGTACCCGGAACAGCACGGGTGTGAGTTCGACTTCAAGACGATGGGCCGGGAGCAGATCGCGAAGGCCAATCCAATAGTGAAGGCCGAAAAACTCGAAAAGATCTGA 687 0.5633 MPSTTATIPGDLSSASSSSPFGSFSVSTHSSRESWENKKASTTSHPPSRSLHLSAGLDRLRSQKMAEEHRCQAPRLCANNCGFFGSPATQNLCSKCYRDLQLKEQQSSSAKLVLNQSIVPQASTAEKWESSSSLLEPVEDLSSPVVAAVDPALPAEEPKSASPAQPNRCMTCRRRVGLTGFKCRCGLTYCGAHRYPEQHGCEFDFKTMGREQIAKANPIVKAEKLEKI 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1191 228 ProSiteProfiles Zinc finger A20-type profile. 71 105 IPR002653 GO:0003677|GO:0008270
Lele31g1191 228 Gene3D - 64 126 - -
Lele31g1191 228 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 76 121 - -
Lele31g1191 228 PANTHER AN1-TYPE ZINC FINGER PROTEIN 73 228 - -
Lele31g1191 228 MobiDBLite consensus disorder prediction 1 52 - -
Lele31g1191 228 Pfam AN1-like Zinc finger 169 205 IPR000058 GO:0008270
Lele31g1191 228 Pfam A20-like zinc finger 75 98 IPR002653 GO:0003677|GO:0008270
Lele31g1191 228 Gene3D - 145 224 IPR035896 -
Lele31g1191 228 FunFam Zinc finger AN1-type containing 6 145 224 - -
Lele31g1191 228 SMART A20_3 74 98 IPR002653 GO:0003677|GO:0008270
Lele31g1191 228 ProSiteProfiles Zinc finger AN1-type profile. 163 209 IPR000058 GO:0008270
Lele31g1191 228 SMART AN1_Zf_4 169 206 IPR000058 GO:0008270
Lele31g1191 228 MobiDBLite consensus disorder prediction 1 31 - -
Lele31g1191 228 SUPERFAMILY AN1-like Zinc finger 155 223 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1191 Lele-ChrLele31 18344539 18348328 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1191 65 228 C2H2 Transcription Factor Family AT3G52800 54.913 1.32e-50 160