Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1180 ATGAAAATATGCATGCTGGGAGATGCTCAACACGTCGAAGAGGCTGAGAAGATAGGGTTGGACTATATGGATGTAGAAGCGCTGAAGAAACTGAACAAAAACAAGAAATTGGTTAAGAAACTTGCCAAAAAATACCATGCCTTTTTAGCTTCTGAAGCTGTCATTAAGCAGATTCCCCGTCTTTTGGGCCCTGGTCTCAACAAGGCAGGGAAATTCCCCACGCTCGTTACTCACCAAGAATCTCTCGAGTCTAAGGTTAATGAAGCCAAGGCCATGGTTAAGTTTCAGCTAAAGAAGGTTCTTTGCATGGGAGTTGCTGTGGGTAATGTTAGCATGGAGGAAAAACAAATCTTCCAAAATGTACAAATGAGCGTCAACTTCCTTGTTTCCTTATTGAAGAAGAACTGGCAGAATGTGAGGTGCTTGTATCTCAAGAGCACAATGGGGAGAACATATCGCGTCTTTTAA 468 0.4252 MKICMLGDAQHVEEAEKIGLDYMDVEALKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNEAKAMVKFQLKKVLCMGVAVGNVSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGRTYRVF 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1180 155 ProSitePatterns Ribosomal protein L1 signature. 55 74 IPR023673 -
Lele31g1180 155 Gene3D - 1 93 IPR016095 -
Lele31g1180 155 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 14 149 - -
Lele31g1180 155 FunFam Ribosomal protein 4 93 - -
Lele31g1180 155 SUPERFAMILY Ribosomal protein L1 1 155 IPR023674 -
Lele31g1180 155 CDD Ribosomal_L1 1 154 IPR028364 -
Lele31g1180 155 Pfam Ribosomal protein L1p/L10e family 1 149 IPR028364 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1180 Lele-ChrLele31 18269547 18271124 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1180 1 155 Cytoplasmic Ribosomal Protein Gene Family AT1G08360 91.613 1.54e-89 258