Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1167 ATGTATAACCCAATGGAGGCGCCTTACCCTGGTTTTCGCTTCTACCCTACAGAAGAAGAGCTCGTCTCCTTCTACCTCCATAACAAGCTCCAAGGTCTCAGACCCGACATGGACATATTCATCCCCGTTGTTCAAATCCACAACGTCGAGCCTTGGAACCTCCCACAGCTTGCGGGAGAGGTGTGTCGTGGCGATACAGAGCAGTGGTTCTTCTTCTCGCCGAGGCAAGAAAGAGAAGCCAGAGGAGGTAGGCCCAACAGAACCACTGCTTCCGGATACTGGAAAGCCACTGGTTCTCCTAGTTACGTTTACTCCTCTGATAACAGAATGATCGGCGTGAAGAAAACGATGGTCTTTTACAGAGGCAAAGCTCCGACTGGAAGGAAAACCAAGTGGAAGATGCATGAATACAGAGCCATTGAACCCTCCAACTCTAACCAATCCGCCGCCTTCATTCCCACGTTGAGGCACGAATTCAGCTTGTGCCGAGTTTATGTGATATCGGGGAGCTTCAGAGCATTTGATCGACGGCCATTAGAGGCGGCGGGGTTTCAAGGTGACGGAGCTTCTGGTTCTGGTGCTGCGACTGGTATTCACGGCGAAGGTGGAAGAGGGGTCGATAGAGGAAGCTCGTCGGACACTTCAAACTCAGGAGCAGAGCATGCAGAAGCGGGAGGATCCAGCAGTACAAATCGGAATGTGAATGATGAGATTGTTCAAGAGCCTCTATGGGAATGGGAACAACTTAATTGGCCCTAG 759 0.5125 MYNPMEAPYPGFRFYPTEEELVSFYLHNKLQGLRPDMDIFIPVVQIHNVEPWNLPQLAGEVCRGDTEQWFFFSPRQEREARGGRPNRTTASGYWKATGSPSYVYSSDNRMIGVKKTMVFYRGKAPTGRKTKWKMHEYRAIEPSNSNQSAAFIPTLRHEFSLCRVYVISGSFRAFDRRPLEAAGFQGDGASGSGAATGIHGEGGRGVDRGSSSDTSNSGAEHAEAGGSSSTNRNVNDEIVQEPLWEWEQLNWP 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1167 252 ProSiteProfiles NAC domain profile. 8 167 IPR003441 GO:0003677|GO:0006355
Lele31g1167 252 MobiDBLite consensus disorder prediction 208 237 - -
Lele31g1167 252 SUPERFAMILY NAC domain 7 165 IPR036093 GO:0003677|GO:0006355
Lele31g1167 252 MobiDBLite consensus disorder prediction 183 239 - -
Lele31g1167 252 Pfam No apical meristem (NAM) protein 10 138 IPR003441 GO:0003677|GO:0006355
Lele31g1167 252 Gene3D NAC domain 17 170 IPR036093 GO:0003677|GO:0006355
Lele31g1167 252 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1167 Lele-ChrLele31 18206130 18207088 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1167 11 252 NAC Transcription Factor Family AT5G22380 58.848 1.55e-89 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele31g1167 NAM 1.7e-33 No_clan