Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1144 ATGGAGTCTCGGATGGATCAGTATGAGATCATGGAGCAGATCGGTCGTGGAGCTTTTGGAGCTGCTATTTTAGTCCATCACAAGGCTGAGAAAAAGAAATACGTGTTGAAGAAAATCAGGCTTGCGCGACAGACTGAACGTTGCAGGAGATCTGCTCATCAAGAGATGGCTCTTATTGCCAGAGTCCAGCACCCTTACATCGTGGAATTTAAGGAGGCATGGGTTGAGAAGGTGAGGATACCCCTAAGTTCATTTTTAGGTTGCTATGTCTGCATTGTCACCGGATACTGTGAAGGTGGAGACATGGCTGAATTGATGAAAAAATCAAATGGGGTTCACTTTCCTGAGGAGGTATTGTGGTTTTATGGATCTGTTGTACTTGCCCAGAAACTCTGTAAGTGGTTTACCCAGTTACTGTTGGCAGTGGAATACTTGCATGCTAACTTTGTTTTACATCGAGACCTGAAGTGTTCCAACATCTTTCTTACCAAGGATCATGATGTTCGCCTAGGGGATTTTGGGCTTGCTAAGACCTTAAAAGCAGATGATCTGGCTTCTTCGGTCGTAGGAACTCCCAATTACATGTGTCCGGAATTGCTTGCAGATATTCCTTACGGATTTAAATCTGATATTTGGTCGCTAGGATATGGCAGGATTGATAAGCAAGATAAATCGTTCCTCCATTGGTCCTTTGCCTCCCTGAAAACACTGATAAAGGGCATGCTGAGGAAAAACCCTGAGCATCGACCCACAGCATCTGAGATCTTAAAGCACCCTTATTTGCAATCTTATGTTGAACAGTATCGTCCATCTTTCAGTCCTCCCACATCCTGTTCTCCTGAAAAGCCTATTCCTGTTACCCATGATCCTCGAAGAAATATGGCTGAAAGTCAAAACTGTAGCAGTTCAAGCAGCGACAAAGATAGTTTAATGTCAAATGACAAAATCATTTCAACAGTGGTGCAGAAGTACAATAACAAAACCACTGAGACAGATGTAACCTCCATTGATGATGAGGATGGTTCTGAGCATATCCTGCCTAGCGAAGAAGATACTAGCTCCAGCACTAGCAATGCCAAATCAGATTGCCAGGAGGTGATGAAACCATCATCTAATGAACGTCAATCAATTGTTGAATCTAAGCCACCAAAAACAATTAAAAACATAATGATGGCACTAAAAGAAGGAAAGGTTAGAGAAAATGGTTATCCAATGAGAGGCAACCGCATCAAGGCTGTTGGTGTATCAGCACAGAAAACAAACGCAGATACATTGCCTAAATTGCCCAAGTCTAATGCTGTTGCTCCTAGTATCAAGCCAAATTTAGAGTCTCCAACTTTGACATCTGCTAAGACATCCCCTGATCCTCCAAAACGAATGCCAAGGTCACATCCTTTAAAGAGTCAGGCACTACTGATGATGGACTCTTCACCAAAAGCTAAACCCAGACACGATGGGATTCCACCATCTGGTCCTATTAAACAAGTTGAAGGAGGTGGAGTCTCTGCCAAAGTGAGGCAAGGGACCCCCCCTAGTTTACTTAGACAACCTTCAATTCGAGGAGGAATGAGGCAGGTTGGGCTTGATGTATGCAATGCGGCAAATGATACAGAGAAGTTAGGTCCAACCAAAATATTGCAGGAGCCAGACAAGACTCAATATAAGGTGCTCAATGGTCATATACCGCTTGCTTCTAGAGAGGTTACAGAGCCTCAGAAGGCTTCTGAAAAATGTTCCAAAGGAATGCAGACAGATAGCAGTAATTCTGTTTCATCTTCAGTGTCTATTCAAGGATATGAACTTTCGGATGATGCAACAAATTTTATTGACATGAGAGAACAGACGCATTTTGATTATGAGAGTGCAACACATATTGAAACTAAAAAGTCACTTCCAGACAAGAGTCATTATCAGTCACCCAATGGTCATATACCATGGGCTTCTGGAGAGATTACTGAGCCTCAGAAGGCTTCTGAAAAATGTTCCAAAGGAATGCAGGCAGATAGCAGTAATTCTGTTTCATCTTCAGTGTCTATACAAGGATTTGAACTTTCTGATGAAGCGACAAATTTTATTGACATGAGAGAACAGACGCCTTCTGATCATGGGAGTGCCACACATATTGAAACCATGAATTCACATCCAGACAGCAGGCCACCTGCTACCTATTTGCACCGTGAGATGGCTGAAACTATATCTAGGGAAGCCTCTCAACCCACCTTGAATGAGAAAGGAAGTTCCGGTTTAACTCTTGATCACCATGCTCCAGATTCCAAGGAAATATTGGCTTCTGAAGATAGTCTCCACATCAATCAGACAAGTACTTCTGCTGCCACCTCGTGTGATAATAGATCTACAAGTCCCTCTGCTATAGCCAGCAAAGAAATTAAAGATCTTCGGGATACTACAAAGCAAGTGACTTCAACCCATCCTCCGAAACTCCCACTATTGAGTGCTGGAGAAAAGTTTGTTTGTGAAGAAGTCGCTCCAGTAAGCAAGCACAGTAATAGGTCTGACACTTTTAGCCAGCCAAAACCTGTGCTTGAGTCCACTGGTGATGACAAGTTCACTGTTAAGGAAAGACTGTCATCTGCAGCTGAAACTGCTCCACCAATCACCTCTACCAATGACCAAAAAGGCTTGCAAGAAGATAAAGGAACCGTTTTGCATAATCCAGTGATAGAAAGGCCAACTGTTGGTAATCTTCCTCCAGCTTTTGATGATGTCATCCATGTTATACGGCATAGCAGTTATCGAGTTGGCAGTGAGCAACCAGTAAGGGAATCTGTGGAGATGGGAGTTCAAAACGTGGATGTTGGTAAATTTCTCAATGCTGTAAGGGATGACTTAGAAATGAGAACCACGGGCACTCCTCTGACCCATAATTCTTCAAATTGCTCTGAGGCTGCGAGCTTGAAGTCAAACATTTCCGATCAATTAGACATGAGAAGCATGAGCACCGCTCCAGCTCTAAAGCCCTCGAGTTGCTCTGATGCTATGTGCACAAAGCCAAGCGTCTCTGATCATTCCAGTGTCAAGGAACACGACGTGAAAAATCTTGTTCCTCGGGTCTCAAAATCCGATTCCCCTGAGTTGACTAAATGCAACTCTTCAGTGACCGAAGGGGAAACCCCAGCAAAGGAAACTTTGGATGTTAAATCATTTAGGCAGAGAGCAGATGCTCTTGAAGGTCTCTTGGAGTTGTCTGCAGAGTTACTGCAGCAAAATAGATTGGAGGAGCTTGATGTTGTTCTAAAGCCCTTTGGGAAAGATATGGTGTCCCCAAGAGAGACAGCCATTTGGTTGGCTAAGAGCTTAAAGGGAATGATGAACGATGACAATGGTGGACGTTGA 3354 0.4344 MESRMDQYEIMEQIGRGAFGAAILVHHKAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEFKEAWVEKVRIPLSSFLGCYVCIVTGYCEGGDMAELMKKSNGVHFPEEVLWFYGSVVLAQKLCKWFTQLLLAVEYLHANFVLHRDLKCSNIFLTKDHDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGYGRIDKQDKSFLHWSFASLKTLIKGMLRKNPEHRPTASEILKHPYLQSYVEQYRPSFSPPTSCSPEKPIPVTHDPRRNMAESQNCSSSSSDKDSLMSNDKIISTVVQKYNNKTTETDVTSIDDEDGSEHILPSEEDTSSSTSNAKSDCQEVMKPSSNERQSIVESKPPKTIKNIMMALKEGKVRENGYPMRGNRIKAVGVSAQKTNADTLPKLPKSNAVAPSIKPNLESPTLTSAKTSPDPPKRMPRSHPLKSQALLMMDSSPKAKPRHDGIPPSGPIKQVEGGGVSAKVRQGTPPSLLRQPSIRGGMRQVGLDVCNAANDTEKLGPTKILQEPDKTQYKVLNGHIPLASREVTEPQKASEKCSKGMQTDSSNSVSSSVSIQGYELSDDATNFIDMREQTHFDYESATHIETKKSLPDKSHYQSPNGHIPWASGEITEPQKASEKCSKGMQADSSNSVSSSVSIQGFELSDEATNFIDMREQTPSDHGSATHIETMNSHPDSRPPATYLHREMAETISREASQPTLNEKGSSGLTLDHHAPDSKEILASEDSLHINQTSTSAATSCDNRSTSPSAIASKEIKDLRDTTKQVTSTHPPKLPLLSAGEKFVCEEVAPVSKHSNRSDTFSQPKPVLESTGDDKFTVKERLSSAAETAPPITSTNDQKGLQEDKGTVLHNPVIERPTVGNLPPAFDDVIHVIRHSSYRVGSEQPVRESVEMGVQNVDVGKFLNAVRDDLEMRTTGTPLTHNSSNCSEAASLKSNISDQLDMRSMSTAPALKPSSCSDAMCTKPSVSDHSSVKEHDVKNLVPRVSKSDSPELTKCNSSVTEGETPAKETLDVKSFRQRADALEGLLELSAELLQQNRLEELDVVLKPFGKDMVSPRETAIWLAKSLKGMMNDDNGGR 1117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1144 1117 MobiDBLite consensus disorder prediction 566 594 - -
Lele31g1144 1117 MobiDBLite consensus disorder prediction 437 453 - -
Lele31g1144 1117 Pfam Protein kinase domain 8 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g1144 1117 Gene3D Phosphorylase Kinase; domain 1 1 82 - -
Lele31g1144 1117 MobiDBLite consensus disorder prediction 271 312 - -
Lele31g1144 1117 MobiDBLite consensus disorder prediction 348 381 - -
Lele31g1144 1117 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 5 614 - -
Lele31g1144 1117 MobiDBLite consensus disorder prediction 867 882 - -
Lele31g1144 1117 MobiDBLite consensus disorder prediction 292 312 - -
Lele31g1144 1117 MobiDBLite consensus disorder prediction 576 594 - -
Lele31g1144 1117 Gene3D Transferase(Phosphotransferase) domain 1 86 282 - -
Lele31g1144 1117 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
Lele31g1144 1117 MobiDBLite consensus disorder prediction 330 381 - -
Lele31g1144 1117 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Lele31g1144 1117 MobiDBLite consensus disorder prediction 1024 1046 - -
Lele31g1144 1117 MobiDBLite consensus disorder prediction 733 747 - -
Lele31g1144 1117 SMART serkin_6 8 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g1144 1117 MobiDBLite consensus disorder prediction 477 518 - -
Lele31g1144 1117 SUPERFAMILY Protein kinase-like (PK-like) 4 311 IPR011009 -
Lele31g1144 1117 MobiDBLite consensus disorder prediction 662 717 - -
Lele31g1144 1117 MobiDBLite consensus disorder prediction 862 883 - -
Lele31g1144 1117 MobiDBLite consensus disorder prediction 1029 1044 - -
Lele31g1144 1117 ProSiteProfiles Protein kinase domain profile. 8 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g1144 1117 MobiDBLite consensus disorder prediction 422 464 - -
Lele31g1144 1117 MobiDBLite consensus disorder prediction 626 764 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1144 Lele-ChrLele31 18075866 18082239 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1144 9 264 MAP Kinase Kinase Gene Family AT4G26070 28.472 4.37e-25 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Lele31g1144 Pkinase 7.2e-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0398 29 2400450 2408212 Lele31g1144 31 18075866 18082239 hybridization
Lele30g1013 30 13577188 13583660 Lele31g1144 31 18075866 18082239 hybridization