Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1139 ATGGGGTTGTTGTTGAAAGAAGTCTTGAAGACTCTGTGCGGCCGGAATCAATGGTCTTATGCTGTGTTCTGGAAGATCGGCTGCCACAATCCTAAGCTGTTAATATGGGAAGAATGCTATTATGAACCCTTGCCTTGTACCTTTCCTCCAAACATTGATAGAACTGGGACATCTAACTTATCCTTCGGAGGTGTGGAAAGCGACAGAGTATGTTCTTTGATTAACAGAATGATGGTGAATAATTCAGTCAATATTGCTGGAGAAGGGATAATCGGGCGGGCAGCGTTCACGGGAAACCATCAATGGATTCTTTTGAACAGTTTTACTAGTGCTGCATATCCACCAGAGGTATACAACGAAGTGCATCATCAATTTTTGGCTGGAATGCAGACCATAGTGGTTATTCCTGTGCTTCCTCATGGGATTGTTCAACTTGGTTCTTTCTTGGCAATAATGGAGGATGTTGGATTTGTGAATGATGTAAGGAGTTTAATCCTTCAATTGGGATGTGTTCCTGGCGTTCTTCTATCCGAAGATTATTCATCAAAAGTTTCTGCTCAAGGTCTTAGTGCAACTGTTACTGGTGGGGTACCTGTGTCAGTAGATCTGCCAGTTGTTTCCTCAAATTGCAGCCCCTATGTGGCTAGTGGCTCCAACCAACAAAGCAATTCATCTCACACTTCAAACTCCGTTGTTCACCAATCTCTACAACACAGGGAAGAGATGAATGATGACCAGGTTTCTGTATTGAGCCATCAAACCCCTAACATTACTCAGATGCTGTCCAAGTACCATGATAACCTCTGCCAACCTAAGGCAATTCCAATAGAAAAACCAAACTTTACTGGCCCATCAGATAATAGAGTTGTGGAGGCACAAGTGATACCCTCAAATCTACAATCATGTCCCCAACAATCTTCTGTTTTGTGGGATTCAAGATCTGCATTCAATGAATTGAATGAGGTTGGCCAATCAAGTCTGAGTGACTGCAGCATGAAGTTTAATGAACAACAAACTTTATCCAGTAGTGGGAGTCAGAATTACGTCAATTCTCTTATAAATGGACCAAGTAATTTTAGCATGACTCAAAGCAAGATGAACAAAGCCCATATGCCTGACCATAGTCAAAATTCTGTTAGTCCATTACTTGGAGGAATCCCGATTCATGGGGCATTGAGTAGCCTGTTGAGGTCAAGTTTGATTAACACCTCTGTTTCAGAACCTCCCAAAGTTGGTGCTGCTGATTTTTCTGGAACACATAAAGTTCGGACTGGACTTAAAAATGATGATTCAACTAAAGCGGGGGCTTTTTCTTTCCATTATGTTGCAAATCAATTAGATGCTTGTCACAGGCCTCTGGAAAGCTCTGATCAGAAGAATCTTCCCACTGATTTAAAGTGTGCTCGTGACAAGTTGGGTCCAAATGATCAAATGATAGATGGTGATTTGCTTCAGGCCCTTAAGTTCCCTTCTCTTTATCTTGAGGAGCATGTGCCTATGAGTGATCAAATTATGGGTTTCTTCAATGGTTCCCTCAATAGTGATGTCACGAGTCAATCTTTCACAAAACAAGAAGCTTATGCTCAACCTTCATCAGGAGATGACCTGTTTGATGTTTTAGGTGTGGATTTTAAGAACAAAATACTGAATGAAAGCTGGAATAAGTTGCTTCCTGATGAATCAGATGTTAAAGCGAGAGTCCTGGACAAAAAGGTTGCGTGTGTGAATATGCAGAGCTTAGATGCTGCTTGCTATTCAGTTGATGAGACAGTATCAGATGGTGGCCTTTTTTCTGGGAGGGGCACTGATCACCTTTTGGACGCTGTGGTCTCAAGAGCCCAATCTGCTGTGAAACAGGATTCTGATGATATGTCTTGCTGGACAACAGTGACTAGGATCAGCAGGGCCTCTGTTCCCTCTTCTTCCCATAAGCAGGTTATGTCAGATCATGCTGATAGTGGATTGTTGAACTTCCCCAAGACTGAGGGTAAATCAAGTGCTGCAGAAACTTGTTCTCTTCGGTCTGGATGTCACAATGATGATGCTGGAAACTGTTCTCAAACTACTTCCATTTATGGGTCTCAACTCAGTTCATGGGTTGAGAATGTTAGCAATGTGAAGCGTGAAAACAGTGTTTCAACTGGTTACTCTAAGCGACCAGATGAAGTTGGCAAATCAAATCGCAAAAGGCTTAAACCTGGAGAGAACCCAAGACCCCGACCTAAAGATCGCCAAATGATTCAAGACCGTGTGAAAGAGTTGCGGGAAATTGTGCCAAATGGCGCAAAATGTAGCATTGATGCGCTTCTTGAACGGACCATAAAGCACATGCTTTTCTTGCAAAGTGTAACAAAGCATGCTGACAAGCTGAAACAAACTGGGAATTCCAAGATTATTAACAAGGAAGGTGGGCTGCTTTTAAAAGATAATTTTGAAGGAGGGGCTACATGGGCATATGAGGTTGGCTCACAATCAATGGTTTGCCCTATCATAGTTGAGGATCTTAATCCGCCTCGTCAGATGTTAGTGGAGATGCTTTGTGAAGAACGGGGTTTCTTTCTGGAGATAGCTGACTTGATCAGGGGAATGGGTTTGACAATTTTAAAGGGGGTAATGGAAGCTCAAAATGATAAGATCTGGGCACGCTTTGCTGTGGAGGCGAATCGGGATGTGACGAGGATGGAAATATTTATGTCACTTGTTCATCTTCTGGAACAAACAGCGAAGGGTGGTGCAGCAGCATGTACATCGAACGAAATGAACAACATGATGGTTTATCACTCCTTCCCACAACCCACTCAGATGGCAGCAACTGGGATACCTATGTCGGGAGCGAGTGTGGTGGATGTGTTTAGTTAG 2859 0.4288 MGLLLKEVLKTLCGRNQWSYAVFWKIGCHNPKLLIWEECYYEPLPCTFPPNIDRTGTSNLSFGGVESDRVCSLINRMMVNNSVNIAGEGIIGRAAFTGNHQWILLNSFTSAAYPPEVYNEVHHQFLAGMQTIVVIPVLPHGIVQLGSFLAIMEDVGFVNDVRSLILQLGCVPGVLLSEDYSSKVSAQGLSATVTGGVPVSVDLPVVSSNCSPYVASGSNQQSNSSHTSNSVVHQSLQHREEMNDDQVSVLSHQTPNITQMLSKYHDNLCQPKAIPIEKPNFTGPSDNRVVEAQVIPSNLQSCPQQSSVLWDSRSAFNELNEVGQSSLSDCSMKFNEQQTLSSSGSQNYVNSLINGPSNFSMTQSKMNKAHMPDHSQNSVSPLLGGIPIHGALSSLLRSSLINTSVSEPPKVGAADFSGTHKVRTGLKNDDSTKAGAFSFHYVANQLDACHRPLESSDQKNLPTDLKCARDKLGPNDQMIDGDLLQALKFPSLYLEEHVPMSDQIMGFFNGSLNSDVTSQSFTKQEAYAQPSSGDDLFDVLGVDFKNKILNESWNKLLPDESDVKARVLDKKVACVNMQSLDAACYSVDETVSDGGLFSGRGTDHLLDAVVSRAQSAVKQDSDDMSCWTTVTRISRASVPSSSHKQVMSDHADSGLLNFPKTEGKSSAAETCSLRSGCHNDDAGNCSQTTSIYGSQLSSWVENVSNVKRENSVSTGYSKRPDEVGKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGNSKIINKEGGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGMGLTILKGVMEAQNDKIWARFAVEANRDVTRMEIFMSLVHLLEQTAKGGAAACTSNEMNNMMVYHSFPQPTQMAATGIPMSGASVVDVFS 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1139 952 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 731 780 IPR011598 GO:0046983
Lele31g1139 952 MobiDBLite consensus disorder prediction 637 661 - -
Lele31g1139 952 MobiDBLite consensus disorder prediction 721 746 - -
Lele31g1139 952 MobiDBLite consensus disorder prediction 214 234 - -
Lele31g1139 952 MobiDBLite consensus disorder prediction 708 746 - -
Lele31g1139 952 CDD bHLH_AtLHW_like 735 804 - -
Lele31g1139 952 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 164 IPR025610 -
Lele31g1139 952 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 939 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1139 Lele-ChrLele31 18036311 18041910 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1139 534 916 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 54.756 7.16e-120 378
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g1039 11 17576480 17591225 Lele31g1139 31 18036311 18041910 CCT
Lele09g1039 09 19568285 19571390 Lele31g1139 31 18036311 18041910 CCT
Lele10g0991 10 21275510 21279173 Lele31g1139 31 18036311 18041910 CCT
Lele31g1139 31 18036311 18041910 Lele09g1029 09 19469420 19472018 CCT
Lele31g1139 31 18036311 18041910 Lele10g0982 10 21113995 21116420 CCT
Lele31g1139 31 18036311 18041910 Lele11g1032 11 17498418 17501019 CCT
Lele31g1139 31 18036311 18041910 Lele12g0294 12 2669191 2671602 CCT
Lele29g0404 29 2443016 2448690 Lele31g1139 31 18036311 18041910 hybridization
Lele30g1006 30 13526029 13531348 Lele31g1139 31 18036311 18041910 hybridization