Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1126 ATGTGTTGGTTCGCACTTCGCAGTATGGTTTTCTCTCTCCTCAGACAATATGCCTTCCCTTTCAGTGATGAGAAGGAAGGTGTGCGGGCTAATGGAATTCAGTTCTTGGCCTTTAATTATGGTTTCCGTTCGTGTCAAGTCCCTTTCAACTCTACTGCTTCTTTCTTTTATCATCTTGCCTTGCAGTGTGTCAGATATCTGAGAAACTCTCATGTTTGTGTTAGTGTTCCCAGCAGCTTACTGACCATAGTGACGGTTAGATGTGGGCATTGTGCTAATTTGCTATCAGTTAACATGGGTGCTTCACTTCAAGCGTTTCCTCCTCATCAGACTCACCCTCAGAAACAGCATCTGAATTTTGAAGAACCAAGCAACAAAGATCTGGGATCATCCTCAAAATTCAGCAAGTTAGCTCCATTTGAGCCTATAGAGCATGAGCAGCCTATGATTCCTCCCATTCGCCCTCCTGAGAAGCGACAACGTGTTCCTTCTGCTTATAATCGGTTCATTAAGGAGGAAATCCAAAGGATCAAGGCTAGTAATCCTGATATCAGCCACAGGGAGGCTTTTAGCACAGCAGCAAAAAATTGGGCACATTTCCCTCACATTCACTTTGGTCTAAAGCTGAATGGGAACAAGCAAGGCGATAAGTTGGACCAGGGGGAGGGAACTCAAAAGTCTAACGGATTCTACTGA 696 0.4454 MCWFALRSMVFSLLRQYAFPFSDEKEGVRANGIQFLAFNYGFRSCQVPFNSTASFFYHLALQCVRYLRNSHVCVSVPSSLLTIVTVRCGHCANLLSVNMGASLQAFPPHQTHPQKQHLNFEEPSNKDLGSSSKFSKLAPFEPIEHEQPMIPPIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLNGNKQGDKLDQGEGTQKSNGFY 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1126 231 MobiDBLite consensus disorder prediction 107 131 - -
Lele31g1126 231 FunFam Axial regulator YABBY 152 222 - -
Lele31g1126 231 PANTHER PROTEIN YABBY 6-RELATED 69 217 IPR006780 GO:0007275
Lele31g1126 231 Gene3D High mobility group box domain 151 202 IPR036910 -
Lele31g1126 231 Pfam YABBY protein 71 207 IPR006780 GO:0007275
Lele31g1126 231 SUPERFAMILY HMG-box 152 200 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1126 Lele-ChrLele31 17902884 17908392 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1126 47 231 C2C2-YABBY Transcription Factor Family AT1G08465 60.526 6.02e-68 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Lele31g1126 YABBY 1.7e-55 CL0114