Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1125 ATGACGCTGGCTGGAGCTCTCGCCATTCTCTTCCTCCTCCTTGCTCTGTACTGTGGGGTAGACCCTTTTGGGCACAGCCCCATCGCTGGCTTCCCGGAGTTCGAAGCCCACAAAATCGACTTGCCGGCTTGGTCCGATGTTTCCACGGACGTTGACGCGGAAAACTTGTTGCAGAAGTCGGAGATTAAGTTTTTGAATCAAGTTCAGGGACCTGAGAGCGTTGCCTTTGACTCTCTTGGTCGTGGGCCTTACACGGGCGTCGCTGATGGGAGAATCTTGTTCTGGAATGGGCACTCTTGGACTGATTTTGCTTATACTTCGTCCAACAGGTCAGAAATATGTAATCCTATAGCATCTGCTACACCATTTAGTTATGTGAAGAATGAGCACATCTGTGGAAGACCTTTGGGACTCAGATTTGACAAGAGAACAGGTGATTTATACATCGCAGATGCATACTTTGGGCTAATGAAGGTGGGACCTGAGGGTGGTTTTGCCACGTCTCTTACCACTGAGGCTGAAGGAGTGCCTCTCAGGTTTACAAACGATGTAGATGTTGATGCAGAAGGAAATGTATATTTCACAGATAGCAGCACTAAATATCCAAGGAGGAATTTCATTCAGCTGGTATTCTCTGGCGAGAATAGTGGCAGGGTTTTGAAATACAACCCCGCCACAGGGGAAACCACTGTTCTTGTCAGGAACGTCCAATTTCCAAATGGCATTTCCTTAAGCAAGGACGGTTCCTTTTTTGTCTTCTGTGAAGGGTCTATTGGCAGGTTACGTAAGTTCTGGCTAAAAGGCAATAAAGCCGGGACCTCAGAGGTGTTAGCCGTTCTTCCTGGATTCCCAGACAATGTGAGAGTGAATGAGGAAGGAGACTTTTGGGTGGCTCTTCATTGTCGAAGGTATATGTACAGTTACATAAATGGCCACCACCCGCGGGTCAGAAAATTCATACTCAATCTTCCAATTCCAACAAGGATTCAATACTTGCTTCAGATAGGATTTAGGGTGCATGCATTAGTTGTTAAGTATAGCCCTGAGGGCAAGCTGCTGCAGATATTGGAGGATAGTCAGGGAAAAGTTGTTAGAGCTGTGAGTGAAGTGGAAGAGAAGGATGGTAAACTCTGGTTTGGAAGTGTTCTCATGCCTTTTCTTGCAGTTTATGATCTGAAATAA 1182 0.4628 MTLAGALAILFLLLALYCGVDPFGHSPIAGFPEFEAHKIDLPAWSDVSTDVDAENLLQKSEIKFLNQVQGPESVAFDSLGRGPYTGVADGRILFWNGHSWTDFAYTSSNRSEICNPIASATPFSYVKNEHICGRPLGLRFDKRTGDLYIADAYFGLMKVGPEGGFATSLTTEAEGVPLRFTNDVDVDAEGNVYFTDSSTKYPRRNFIQLVFSGENSGRVLKYNPATGETTVLVRNVQFPNGISLSKDGSFFVFCEGSIGRLRKFWLKGNKAGTSEVLAVLPGFPDNVRVNEEGDFWVALHCRRYMYSYINGHHPRVRKFILNLPIPTRIQYLLQIGFRVHALVVKYSPEGKLLQILEDSQGKVVRAVSEVEEKDGKLWFGSVLMPFLAVYDLK 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1125 393 FunFam Putative strictosidine synthase 54 393 - -
Lele31g1125 393 Gene3D - 52 393 IPR011042 -
Lele31g1125 393 PANTHER STRICTOSIDINE SYNTHASE-RELATED 7 385 - -
Lele31g1125 393 SUPERFAMILY Calcium-dependent phosphotriesterase 48 392 - -
Lele31g1125 393 Pfam Strictosidine synthase-like, N-terminal 57 94 - -
Lele31g1125 393 Pfam Strictosidine synthase 182 268 IPR018119 GO:0009058|GO:0016844
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1125 Lele-ChrLele31 17894104 17896954 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0421 29 2586889 2590350 Lele31g1125 31 17894104 17896954 hybridization
Lele30g0988 30 13377953 13381297 Lele31g1125 31 17894104 17896954 hybridization