Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1122 ATGTACAACGGTATGATGGATCCTGAGATGATCAGAATCGCTCAGGAGCAGATGAGTCGTATGTCACCTGCCGAGTTTGCTCAGATCCAACAACAGATGATGTCTAATCCAGAGTTAATGAGGATGGCCTCGGAAAGCATGAAGAACATGAGGCCTGAAGACTTCAAACTTGCTGCAGAGCAGTTAAAGCATACACGTCCTGAACAGATGGCTGAGATTGGTGAGAAAATGGCAAATGCAACACCTGAAGAAATTGCAGCTATGCGTGCCCGTGCTGATGCGCAGATTAAATATGAATTAAGTGGAGCTGAGATGTTGAAGAAGCAGGGCAATGAACTTCACAGCCAGGGAAGATTCGATGAAGCAATGCAGAAGTATTGTCTTGCCAAGCAAAACATTAGAGAAATTCCATCCTCCCAAAGTAGAAAGCTTATTTTAGCATGCTCGCTTAACTTGATGTCTTGTTACCTGAAGACAGAGCAGTATGATGAATGCGTAAAAGAAGGTTCTGAGGTTTTGGCGTATGATGCAAAAAATCTTAAAGCTCTTTATCGAAGAGGTCAAGCATATAAGGAACTTGGTCTACTAAAGGATGCTGTTAATGATTTGAGCATGGCATATGAAGTTTGGCCAGATGATGATACAGTTGCAAACCTTTTGAGGGAGACCAAGGAAATGTTGGCAGAGGGGGGTGGCGACCATGCCCCTAGAGCTAGAGGATTAGTAATTGAAGAAATAACTGAAGAAGATCAGAATGTTCCGGCTCAGAACATTGGAAGCTCATCTGTGGAGCAAACAGTGGCTCAGCCAAAAACTTTCAACGAGTCTTCTAAGAGTTCCAGTACAGCCATCAATGAAAATTTAAAATTAAATATGGAAGGTTTAAATGCGCTGAAAAATGATCCTGAATCTATCAGATCGTTCCAAAATTTCATTTCAAATACCGACCCTGCCACTCTTGCTTCTTTGAATGCCGGACAATCCAAAGATATGTCTCCTGATATGATTAGAACTGCCACAAACATTATTAGCAAAATGTCACCCCAGGAACTTCAAAAAATGCTTGACATGGCTTCCTCGTATCAGGGGGACAACCCATGTTTAAGAGGATCCCCTGATTCTACTATCGACTCTGGATCAATTCCTCCAAATGTGACTCCTCACATGTTTAAAACAGCTTCTGATATGATAAGTAAAATGCCACCAGAGGATCTTCAGAAGATGTTTGAAATGTCTTCCTCAATGTCTGGGAAAGCATCTAGTTCATCATCTGCAGCTATGGACAAGAATGTGAGAAATGCTTCTCAGTCAAACATCTCCTCCTCGAATGCTAGTAGAAGTAATACTTTTGCTGAATCAAGTTCTCCTCATGATTCGTTTTTAAATACGAGAAATGCTGCTCGGTCAAACTTCCCATCCTCAAGTACTGATTTGCAAGAACAGATGAGAAACCAGATGAAAGATCCAGCCTTGCGACAGATGTTTACATCAATGATTAAAAATATGAGCCCAGAAATGATGGCAAACACAGGCGAACAGTTAGGTGTTAAGCTTTCAAAAGAAGATGCAGCAAAAGCTCAGCAAGCCATGTCATCCTTGTCACCAGATGACTTGGATAGAATGATGCGATGGGCTGATCGGATTCAAAGAGGAGTTGAAGGTGCGAAGAATACGAAGAATTGGCTACTAGGAAAACCTGGTATGATATTGGCAATCGTCATGCTCATTTTCGCAGTAATTCTTCACCGGCTGGGTTTCATTGGTGGCTAG 1770 0.4192 MYNGMMDPEMIRIAQEQMSRMSPAEFAQIQQQMMSNPELMRMASESMKNMRPEDFKLAAEQLKHTRPEQMAEIGEKMANATPEEIAAMRARADAQIKYELSGAEMLKKQGNELHSQGRFDEAMQKYCLAKQNIREIPSSQSRKLILACSLNLMSCYLKTEQYDECVKEGSEVLAYDAKNLKALYRRGQAYKELGLLKDAVNDLSMAYEVWPDDDTVANLLRETKEMLAEGGGDHAPRARGLVIEEITEEDQNVPAQNIGSSSVEQTVAQPKTFNESSKSSSTAINENLKLNMEGLNALKNDPESIRSFQNFISNTDPATLASLNAGQSKDMSPDMIRTATNIISKMSPQELQKMLDMASSYQGDNPCLRGSPDSTIDSGSIPPNVTPHMFKTASDMISKMPPEDLQKMFEMSSSMSGKASSSSSAAMDKNVRNASQSNISSSNASRSNTFAESSSPHDSFLNTRNAARSNFPSSSTDLQEQMRNQMKDPALRQMFTSMIKNMSPEMMANTGEQLGVKLSKEDAAKAQQAMSSLSPDDLDRMMRWADRIQRGVEGAKNTKNWLLGKPGMILAIVMLIFAVILHRLGFIGG 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1122 589 ProSiteProfiles TPR repeat profile. 180 213 IPR019734 GO:0005515
Lele31g1122 589 Gene3D Tetratricopeptide repeat domain 91 231 IPR011990 GO:0005515
Lele31g1122 589 SUPERFAMILY TPR-like 97 226 IPR011990 GO:0005515
Lele31g1122 589 MobiDBLite consensus disorder prediction 432 481 - -
Lele31g1122 589 SMART tpr_5 180 213 IPR019734 GO:0005515
Lele31g1122 589 SMART tpr_5 103 136 IPR019734 GO:0005515
Lele31g1122 589 SMART tpr_5 146 179 IPR019734 GO:0005515
Lele31g1122 589 PANTHER TPR_REGION DOMAIN-CONTAINING PROTEIN 4 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1122 Lele-ChrLele31 17868542 17874273 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1122 107 229 Calmodulin-binding Proteins AT5G48570 34.109 9.97e-13 68.9