Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1115 ATGGCTTTGAATCAATCACGGGTATCTTGTAGTCCAGTTCTGTTGAAGGTGGGTTTAGGGGTGGTGGCGCTGTGCATCGCCGGCTACATTCTGGGTCCTCCTCTGTACTGGCATTTCATGGAAGGTGTTGCTGCCCTGAAGCACTCCTCTTCTACTTGTGCTCCCTGCGTCTGCGATTGCTCTTCTGAACCCGTCCTCTCCATACCCCAAGATTGTGCAAAGCATGATCCAGAGGTGAGCGGAGACACTGAAAAGAACTTTGCGGAGTTGTTGTCAGAAGAGCTAAAATTACGAGAAACTGAAGCTCTGGAAACTCACCGACGTGCTGACATGGCTCTGCTTGAGGCTAAGAAAATTACATCTCAGTATCAAAAGGAAGCAGACAAGTGCAATTCAGGGATGGAGACATGCGAGGATGCCAGGGAGAAAGCCGAGGCAACATTAGCAGCACAAAAGAAGTTGACAGTGTTGTGGGAACTGAGGGCTCGTCAGAAAGGATGGAAAGAAGGGGTTTCCAAGTCTAATGCCCAGTCTCAGGGAAAAGTACAGACTTCTTAG 558 0.4928 MALNQSRVSCSPVLLKVGLGVVALCIAGYILGPPLYWHFMEGVAALKHSSSTCAPCVCDCSSEPVLSIPQDCAKHDPEVSGDTEKNFAELLSEELKLRETEALETHRRADMALLEAKKITSQYQKEADKCNSGMETCEDAREKAEATLAAQKKLTVLWELRARQKGWKEGVSKSNAQSQGKVQTS 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1115 185 Coils Coil 134 154 - -
Lele31g1115 185 Pfam Protein of unknown function (DUF1068) 14 170 IPR010471 -
Lele31g1115 185 PANTHER EXPRESSED PROTEIN 15 178 - -
Lele31g1115 185 MobiDBLite consensus disorder prediction 170 185 - -
Lele31g1115 185 MobiDBLite consensus disorder prediction 165 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1115 Lele-ChrLele31 17831767 17833635 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele12g0300 12 2750258 2758835 Lele31g1115 31 17831767 17833635 CCT
Lele29g0432 29 2637946 2639897 Lele31g1115 31 17831767 17833635 hybridization
Lele30g0975 30 13324735 13326800 Lele31g1115 31 17831767 17833635 hybridization