Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1099 ATGCCGAGGAATATGATCTACAGTGACGGCGACTTTAGAGACAAGGTTGAGGACGAGGCGGTGGATGCGGCGAACGCAGACGCGAAGCAGAACATGAAGAAGGGGCCGTGGACGGCGGCGGAGGACGCCATTTTAATAGAGTACGTGAACAAGTACGGCGACGGAAATTGGAATTCAGTGCAGAAGAACTGTGGGTTGACGAGGTGTGGCAAAAGTTGCAGGCTCCGATGGGCCAACCATCTCAGGCCTAATCTCAAGAAAGGTGCTTTCTCTCAGGAAGAAGAACAGCTCATCGTCGAGCTTCACGCCAAGCTCGGAAACAAATGGGCTCGCATGGCCTCCCTGTTACCAGGGAGAACTGATAATGAAATAAAGAATTTCTGGAACACGAGAATGAAAAGACGCCAGAGAGCTGGTTTGCCTCTGTATCCTCCAGAACTTGAAGAAGAAGCTTCTCTGCATCATCATCTTCACCAAAGCCAGCAATACCAAGCACCACCACCACCACCACCTCACCATGCTCCTTCTTTCTCATTCTCTTCTCTCCTATCTTCTTCCTCCAACAAACGCCATAAGCTCAATGGCCAGCTAAACAATTCTGATTTTGATACAACTTATGACAAAAGCTATCATCAACACCCTCAAAACATGGGCCTGCCATTACTATCCTCTCTTTCTCCCAATGGGTTTAATTATTCCTGTGGTGCCATGACAGAGATCTCTTCAACCCAATCGGAAACACCTCCTTCGTCCTACAGCACTGGTGGGTTTCATGGCTTAATGGGAGGTTCCACCATTAATGGTCCTGGTCTTGACTACCATGAGATTGCACCATTGTCATCATCAACTGAAGGAAACAGTGGGCTCTTGGATGCTGTATTAATGGAGTCTCAAGCCCTTTCGCGCAGTGACAAACGCAAGTCGAAAAGCAATGATTCTGCTGCAGGAAGGAAGTTATCTTTGAAGAGGAAACGCATTGCAGACGAAGAAGACAAAGGCACTGAGCAATTGGAGTCATTCCAGAGGGATGATTTAAGCTCTTCTCAATTATCAACAGAGAAGAAGGCATCATCAGAATCTGTTAGGGATAATGATCCATTGGAGGAGATGAGTTCGATGGACGATGGCTTGTTTAGCTTGCTGAACAATTTTCCGTCAGAAATGCCAGTGCCCGAGTGGTACCGAAGAGGAGAAAGACAAGCATTGGAAGCTGAAAATCAACAAGAAGCTTCATTGGGCCAACCTGATGATCAGCAACTTGCTTGGACCCTCGGAACCTGCTGGTCCAACGACTTGCCCAGTATATGCTAA 1311 0.4752 MPRNMIYSDGDFRDKVEDEAVDAANADAKQNMKKGPWTAAEDAILIEYVNKYGDGNWNSVQKNCGLTRCGKSCRLRWANHLRPNLKKGAFSQEEEQLIVELHAKLGNKWARMASLLPGRTDNEIKNFWNTRMKRRQRAGLPLYPPELEEEASLHHHLHQSQQYQAPPPPPPHHAPSFSFSSLLSSSSNKRHKLNGQLNNSDFDTTYDKSYHQHPQNMGLPLLSSLSPNGFNYSCGAMTEISSTQSETPPSSYSTGGFHGLMGGSTINGPGLDYHEIAPLSSSTEGNSGLLDAVLMESQALSRSDKRKSKSNDSAAGRKLSLKRKRIADEEDKGTEQLESFQRDDLSSSQLSTEKKASSESVRDNDPLEEMSSMDDGLFSLLNNFPSEMPVPEWYRRGERQALEAENQQEASLGQPDDQQLAWTLGTCWSNDLPSIC 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1099 436 CDD SANT 89 130 IPR001005 -
Lele31g1099 436 Pfam Myb-like DNA-binding domain 37 97 - -
Lele31g1099 436 SMART sant 33 83 IPR001005 -
Lele31g1099 436 SMART sant 86 134 IPR001005 -
Lele31g1099 436 MobiDBLite consensus disorder prediction 340 355 - -
Lele31g1099 436 MobiDBLite consensus disorder prediction 299 372 - -
Lele31g1099 436 MobiDBLite consensus disorder prediction 300 339 - -
Lele31g1099 436 ProSiteProfiles Myb-like domain profile. 29 81 IPR001005 -
Lele31g1099 436 MobiDBLite consensus disorder prediction 177 211 - -
Lele31g1099 436 MobiDBLite consensus disorder prediction 151 211 - -
Lele31g1099 436 SUPERFAMILY Homeodomain-like 31 128 IPR009057 -
Lele31g1099 436 Gene3D - 33 86 - -
Lele31g1099 436 FunFam Transcription factor GAMYB 89 135 - -
Lele31g1099 436 ProSiteProfiles Myb-like domain profile. 82 132 IPR001005 -
Lele31g1099 436 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 26 411 - -
Lele31g1099 436 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 29 81 IPR017930 -
Lele31g1099 436 FunFam MYB-related transcription factor 33 86 - -
Lele31g1099 436 CDD SANT 36 81 IPR001005 -
Lele31g1099 436 MobiDBLite consensus disorder prediction 397 416 - -
Lele31g1099 436 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 82 136 IPR017930 -
Lele31g1099 436 Gene3D - 89 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1099 Lele-ChrLele31 17741416 17743355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1099 5 163 MYB Transcription Factor Family AT5G06100 67.683 6.82e-70 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele31g1099 Myb_DNA-bind_6 2.6e-15 CL0123