Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1086 ATGCCGGCCGGGATTATGATTCCGGCGAGAAACATGCCCTCCATGATCGGAAGGAACAACAGCGTTGGCGCTGCGTTAGGATCATCCTCGGGCCTTTCTCTTGGTCAGCAGCCAAACATGATGGAAGGCCATCTCCTCTCAGCACTGGACATGGCTCAAAACACATCGGAGAGCGACATCCCTCGAATCCGAGACGACGATTTCGACACCGCCACCAAGTCCGGCAGCGAAAATCAGGAAAACGGAGCCTCCGGTGACGACCAAGACCAACGCCCCAAGAAGAAGCGCTACCACCGCCACACCCAGCACCAGATCCAGGAAATGGAAGCTTTCTTCAAGGAGTGCCCTCACCCCGACGACAAGCAAAGGAAGGAGCTGAGTCGTGAATTAGGGTTGGAGCCATTGCAGGTCAAGTTCTGGTTCCAAAACAAGCGCACCCAGATGAAGAACCAACATGAGCGGCATGAGAACTCACACCTTAGAGCCGAAAACGAAAAGCTTCGTGCAGATAACATGAGGTACAGAGAAGCTCTTAGCAATGCCTCTTGTCCTAACTGTGGTGGACCAACCGCTATAGGAGAAATGTCCTTCGATGAACATCATTTGAGACTCGAAAATTCCCGCCTTAGGGAAGAGATTGATAGAATTTCAGCAATTGCGGCCAAGTACGTAGGGAAGCCCGTGGTGAACTATGCGTTACTTTCTCCATCTTCGGTTCCACCTCGTCCTTTAGAGCTTGGGGTTGGTGGTGGTTATGGAGGACCGGCGGGGATTGGTGGCTGTGCTGGAGACATGTATGGAGGGGCCGGAGATCTGTTGAGGTCGATAAGTGGACTGACGGAAGCCGATAAGCCGATGATCATAGAGCTTGCAGTTGCGGCCATGGAAGAACTGGTGAGGATGGCTCAGATGGGAGAGCCTCTTTGGATGACCACCCTGGATGGCTCCACAGCTGTGCTGAATGAAAACGAGTACATGAGATCTTTTCCTCGAGGAATTGGCCCTAAACCCACTGGCTTGAGATGCGAAGCTTCTAGAGAAACTGCAGTCGTCATCACGAATCATATCAACCTCGTCGAGATTCTCATGGATGTGAACCAGTGGTCGACAGTGTTCTCTGGGATAGTGTCAAGAGCAATGACTATGGAAGTACTATCAACGGGGGTGGCTGGGAACTACAACGGTGCCTTGCAAGTGATGACAGCAGAGTTACAAGTGCCTTCGCCTCTAGTGCCAACTCGAGAGAGTTATTTCGTGAGGTATTGCAAGCAGCACAGTGACGGGACATGGGCCGTGGTGGACGTGTCTCTGGACCATCTCAGCACTGCTCCCGTCAAATGTAGAAGACGACCTTCTGGTTGCTTAATCCAAGAAATGCCCAATGGCTATTCCAAGGTGACGTGGATCGAACATGTCGAAGTGGATGATAGAGGCGTACATAGTCTATACAAGCAGCTTGTTAGTTCAGGCCATGCATTTGGTGCCAAAAGATGGGTTGCCACCTTAGATCGACAGTGCGAAAGGCTTGCTAGTGCCATGGCTTCCAACATTCCCACCGGTGATGTCGGAGTGATAACAAACCAAGACGGGAGGAGGAGTATGTTGAAGCTGGCTGAGAGAATGGTGATAAGCTTCTGCGCCGGAGTGAGCGCTTCCACGGCTCACACATGGACAACACTCTCTGGAACCGGGGCCGACGATGTTCGGGTCATGACCCGAAAGAGCGTCGACGACCCGGGAAGACCCCCCGGCATCGTTCTCAGCGCGGCAACCTCCTTTTGGCTTCCTGTTCCTCCCAAGCGAGTGTTTGATTTCCTCCGTGATGAAAACTCCAGAAGCGAGTGGGATATTCTTTCCAACGGTGGGGTGATCCAAGAAATGACACACATAGCTAACGAACGAGATACAGGGAACTGTGTTTCCCTACTCCGAGTTAATAGTGCTAATTCGAGCCAAAGTAATATGTTGATACTGCAAGAGAGCTGCACAGACTCAACGGGGTCATTCGTGATATATGCTCCCGTGGATATAGTGGCCATGAACGTGGTTCTGAGTGGAGGGGATCCTGACTACGTGGCACTTCTTCCTTCGGGTTTTGCTATCCTCCCCGATGGTACCACGACTCATGGAGGAGGTGGCATTCCTGAAACAGGCCACGGTGGATCCCTCTTGACCGTTGCTTTTCAAATCTTGGTTGATTCCGTGCCCACTGCTAAGCTCTCTCTTGGATCTGTCGCAACTGTCAATAACCTGATTGCCTGTACTGTGGAGCGAATTAAGGCTTCTTTATCTTGTGAAGCTGCTTGA 2307 0.5171 MPAGIMIPARNMPSMIGRNNSVGAALGSSSGLSLGQQPNMMEGHLLSALDMAQNTSESDIPRIRDDDFDTATKSGSENQENGASGDDQDQRPKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENSHLRAENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENSRLREEIDRISAIAAKYVGKPVVNYALLSPSSVPPRPLELGVGGGYGGPAGIGGCAGDMYGGAGDLLRSISGLTEADKPMIIELAVAAMEELVRMAQMGEPLWMTTLDGSTAVLNENEYMRSFPRGIGPKPTGLRCEASRETAVVITNHINLVEILMDVNQWSTVFSGIVSRAMTMEVLSTGVAGNYNGALQVMTAELQVPSPLVPTRESYFVRYCKQHSDGTWAVVDVSLDHLSTAPVKCRRRPSGCLIQEMPNGYSKVTWIEHVEVDDRGVHSLYKQLVSSGHAFGAKRWVATLDRQCERLASAMASNIPTGDVGVITNQDGRRSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENSRSEWDILSNGGVIQEMTHIANERDTGNCVSLLRVNSANSSQSNMLILQESCTDSTGSFVIYAPVDIVAMNVVLSGGDPDYVALLPSGFAILPDGTTTHGGGGIPETGHGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCEAA 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1086 768 ProSitePatterns 'Homeobox' domain signature. 126 149 IPR017970 GO:0000981|GO:0006355
Lele31g1086 768 MobiDBLite consensus disorder prediction 53 102 - -
Lele31g1086 768 Pfam START domain 290 508 IPR002913 GO:0008289
Lele31g1086 768 SMART START_1 289 508 IPR002913 GO:0008289
Lele31g1086 768 Pfam Homeodomain 94 150 IPR001356 GO:0003677
Lele31g1086 768 CDD homeodomain 94 152 IPR001356 GO:0003677
Lele31g1086 768 Gene3D - 357 505 IPR023393 -
Lele31g1086 768 SUPERFAMILY Homeodomain-like 83 151 IPR009057 -
Lele31g1086 768 SMART HOX_1 92 155 IPR001356 GO:0003677
Lele31g1086 768 FunFam Homeobox-leucine zipper protein HDG1 79 167 - -
Lele31g1086 768 ProSiteProfiles 'Homeobox' domain profile. 91 151 IPR001356 GO:0003677
Lele31g1086 768 ProSiteProfiles START domain profile. 280 511 IPR002913 GO:0008289
Lele31g1086 768 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 90 763 IPR042160 -
Lele31g1086 768 CDD START_ArGLABRA2_like 284 507 - -
Lele31g1086 768 Coils Coil 145 177 - -
Lele31g1086 768 FunFam Homeobox-leucine zipper protein GLABRA 2 289 507 - -
Lele31g1086 768 MobiDBLite consensus disorder prediction 59 73 - -
Lele31g1086 768 SUPERFAMILY Bet v1-like 281 510 - -
Lele31g1086 768 Gene3D - 79 168 - -
Lele31g1086 768 SUPERFAMILY Bet v1-like 528 760 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1086 Lele-ChrLele31 17673333 17677383 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1086 37 768 Homeobox Transcription Factor Family AT1G05230 77.162 0.0 1153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele31g1086 START 3.4e-57 CL0209