Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1081 ATGGTAATTGCTATTAGATTCATCATCTACAGGGATGAAGAAGAGGGCAACGATCAGCATCAAGAAGGAGGATCAGACGGTTGCAAGGGATCTTCTGGTGCGCCCCAATCTCCTTCTTTAGGTCAGCCACGGTGGCATCATTCTTCACCGGCACGTAGAAAAGTGTTCCTGTTAAACTCTCCACCACCACTTTCACAATGGCGTCTTACACAGATCAATCTGCAGCAGGCTCTGATCCATTTTTGCACTTGCTTGTCTCTCAAGGATCTTGGCCTTGAGTTAACACTGGATGAAGACCCCCCTAATAATACAGTTGCCGACTTTCGTGCTAGAGCGAATAAAATCCTAAACCGCTTCGTTTTTCAGCGTTGTTGTTCTTGGGCACTTCCTTACTTAGCGGTTTATTATAATCAGAAGAAGTCCTTTTGCGAGAACCTACCGAGGGCGAAGTTCATGTCTGAATTCGATTCACAGACTCCAAATGCTTATGATCCCTTTGCTGATGCAAATGCTGAGGACTCGGGTGCTGGAACAAAAGAGTATGTTCATGTGCGTGTGCAACAACGCAATGGAAGGAAAAGTCTGACAACTGTTCAAGGGTTGAAGAAAGAGTACAGCTATAGCAAGATACTGAAGGACCTGAAGAAAGAGTTCTGCTGTAATGGTACTGTTGTCCAAGATCCTGAATTGGGCCAGGTCATACAGCTTCAGGGAGATCAAAGGAAGAACGTTTCCACATTCCTTGTGCAGCCTGCGTACTACACTCCATGGCAGCAGCACAGTTCCTTCCCTGCGTCTCCTCTTACAAAGAACAAACACTGA 822 0.4599 MVIAIRFIIYRDEEEGNDQHQEGGSDGCKGSSGAPQSPSLGQPRWHHSSPARRKVFLLNSPPPLSQWRLTQINLQQALIHFCTCLSLKDLGLELTLDEDPPNNTVADFRARANKILNRFVFQRCCSWALPYLAVYYNQKKSFCENLPRAKFMSEFDSQTPNAYDPFADANAEDSGAGTKEYVHVRVQQRNGRKSLTTVQGLKKEYSYSKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQPAYYTPWQQHSSFPASPLTKNKH 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1081 273 MobiDBLite consensus disorder prediction 24 44 - -
Lele31g1081 273 SUPERFAMILY eIF1-like 153 258 IPR036877 GO:0003743|GO:0006413
Lele31g1081 273 FunFam Eukaryotic translation initiation factor SUI1 153 256 - -
Lele31g1081 273 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 159 250 - -
Lele31g1081 273 CDD eIF1_SUI1 180 250 IPR005874 GO:0003743
Lele31g1081 273 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 157 251 IPR005874 GO:0003743
Lele31g1081 273 Pfam Translation initiation factor SUI1 179 250 IPR001950 GO:0003743|GO:0006413
Lele31g1081 273 Gene3D - 145 259 - -
Lele31g1081 273 ProSiteProfiles Translation initiation factor SUI1 family profile. 182 252 IPR001950 GO:0003743|GO:0006413
Lele31g1081 273 MobiDBLite consensus disorder prediction 14 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1081 Lele-ChrLele31 17628037 17634465 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1081 152 252 Eukaryotic Initiation Factors Gene Family AT4G27130 91.089 1.26e-64 196
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0464 29 2838442 2839818 Lele31g1081 31 17628037 17634465 hybridization
Lele30g0939 30 13071579 13073297 Lele31g1081 31 17628037 17634465 hybridization