Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1073 ATGTGCAAGGGTGCAGCAGAGGAAAAGCATGGTGGTTTCTGCCGGAGGGGCCACCTCCGGCCACCTGAAGACGACACTTTGCATGGTGAAACCAGAGGTTCAATACCGTGTGAGCTATGTGGATTAAGGGCTTCGCTGTATTGTCTGGCTGATAAGGCGTATCTATGCAGAAAATGTGACAAATGGGTTCATAAAGCTAATTTCTTGGCGTTTAGGCACGTAAGGACACAGGCCTCAAAATTTGGGACGAACCGTTGTGTACAATTCCTCTGGAATCAGGAAAGATTAAACAGACTGGTAACTAATGGAGAAGAAAATCAATTTGTTAGCGACATGGAAGTAAGAATGCTTTCAAGAAACATTACGTACCTTGAAGATAAGCATGAAAACATAATGTAA 399 0.4361 MCKGAAEEKHGGFCRRGHLRPPEDDTLHGETRGSIPCELCGLRASLYCLADKAYLCRKCDKWVHKANFLAFRHVRTQASKFGTNRCVQFLWNQERLNRLVTNGEENQFVSDMEVRMLSRNITYLEDKHENIM 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1073 132 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 36 77 - -
Lele31g1073 132 SMART bboxneu5 32 78 IPR000315 GO:0008270
Lele31g1073 132 Pfam B-box zinc finger 36 73 IPR000315 GO:0008270
Lele31g1073 132 CDD Bbox1_BBX-like 36 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1073 Lele-ChrLele31 17594508 17596135 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1073 1 75 C2C2-CO-like Transcription Factor Family AT3G21890 49.383 8.73e-17 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele31g1073 zf-B_box 1.2e-05 No_clan