LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele31g1066	ATGAAAACTGAGTTAAAAGGAAGCACTACTTCCATTTCCCTCCAATACCCAACTCTCTTCAACGAGCACCACAGTAATCCTGATCTCTCAGGAGAACTCAAAGGCTGTCTCGGAAGCCTCGATGGAGCTTGTATAGAGAAGCTCTTACTTCATTGTGCCAGCGCTTTAGAGAGCAACGATGTAACTTTAGCTCAACAAGTCATGTGGGTTCTAAATAATGTCGCTTCTCAGGTTGGCGATACCAACCAAAGGCTTACGTCCTGGTTTCTCAGAGCCTTAATCTCTAGGGCTTCACGAGTCTGCCCTATGAACTTCAACGGAAGAAGCAGTACCATCCAGAGAAGGTTGATGTCCGTGACAGAGCTTGCAGGGTACGTTGATCTTATCCCTTGGCATAGGTTTGGGTTTTGTGCTTCCAATAGTGCTATTTTTAAGGCAATTCATGGGTTCCAAAGAGTGCACATATTAGATTTTAGCATTACCCATTGTATGCAGTGGCCTACTCTTATAGATGCTTTGGCCAAAAGGCCAGAAGGCCCTCCTGAGGTTAAAATCACAGTGCCTTCTTGTAGGCCACCTGTCCCACCTTTGGTCAATATTTCAACAGAAGAAGTTGGGCTGCGTTTGGGGAATTTTGCTAAGTTCAGGGATGTCCCTTTTGAATTCAATGTGATTGGAAGACGGAGCACATCTTCTGAATTAAGCAATATTGATGATTCATCATCCAGCTTTCCCTTTGAGTCACTGTTAAGTCACTTGAATCCCACTACGTTAAATCTTAGGGAAGACGAAGCTTTGGTGGTAAATTGTCAAAATTGGCTACGTTACTTGTCTGATGAAAGAAAGGGGAGTTTCCAAGATGCATCCCCTAGGAACACTTTCATAAATCTAATTAAAAGTCTTAACCCTAGAATAGTACTATTGGTTGACGAGGATTGTGATCTTAGTGTACCAAGTCTAACGTCAAGAATCATAACTTGTTTCAACTATTTGTGGATACCCTTTGATGCTTTGGAGACCTTTTTGCCTAAAGATAGCAACCAGAGGGTAGAGTACGAATTTGACATAGGACAGAAAATTGAGAACATCATTAGCTTCGAGGGGGTTCAGAGAATAGAGAGATTAGAGAGCGGCGCAAAAATGTCGCAAAGGATGAAAAATGGAGGTTTCTTCAACGTTCCATTCTGTGAAGAAACTGTGAGAGAAGTTAAGGCTTTGCTTGATGAGCATGCAAGCGGATGGGGCATGAAGATAGAAGAAGACATGCTGGTTCTCACATGGAAAGGCCATAACTCTGTCTTCGCCTCAGCTTGGGTCCCCAGTGAGAGTTAA	1332	0.4309	MKTELKGSTTSISLQYPTLFNEHHSNPDLSGELKGCLGSLDGACIEKLLLHCASALESNDVTLAQQVMWVLNNVASQVGDTNQRLTSWFLRALISRASRVCPMNFNGRSSTIQRRLMSVTELAGYVDLIPWHRFGFCASNSAIFKAIHGFQRVHILDFSITHCMQWPTLIDALAKRPEGPPEVKITVPSCRPPVPPLVNISTEEVGLRLGNFAKFRDVPFEFNVIGRRSTSSELSNIDDSSSSFPFESLLSHLNPTTLNLREDEALVVNCQNWLRYLSDERKGSFQDASPRNTFINLIKSLNPRIVLLVDEDCDLSVPSLTSRIITCFNYLWIPFDALETFLPKDSNQRVEYEFDIGQKIENIISFEGVQRIERLESGAKMSQRMKNGGFFNVPFCEETVREVKALLDEHASGWGMKIEEDMLVLTWKGHNSVFASAWVPSES	443

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele31g1066	443	ProSiteProfiles	GRAS family profile.	36	439	IPR005202	-
	Lele31g1066	443	PANTHER	OSJNBA0084A10.13 PROTEIN-RELATED	45	428	IPR005202	-
	Lele31g1066	443	Pfam	GRAS domain family	46	438	IPR005202	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele31g1066	Lele-ChrLele31	17555464	17556795	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele31g1066	33	440	GRAS Transcription Factor Family	AT3G49950	47.368	9.11e-123	361

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	GRAS	Lele31g1066		GRAS	7.5e-89	CL0063