Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1043 ATGTGCTTCTTAGGACCTAAGCAACTTTCTCAAGATGACAGTAATGGAGGAACTTTATATCTAAAACTTGCAGCTTCTGAGTTTTCTGATGCTAAACGGAAAAATGGAGAAATTATTGGTATTGTGGTGGGCACTGTAGGTGGTTTAGGGGTTCTCCTGGTTATTCTGCTGTTTGTGATAATCAGAAGAAGGAGAAGAATTGTTGGAAAAGGAAAATCGGTGGAGGGTTCATTGATGGCATTTGGGTACAGAGATTTACAAAATGCAACCAAGAATTTCTCTGAAAAACTAGGAGGAGGAGGTTTTGGTTCTGTTTTCAAAGGCACATTGTCGGATTCCAGTGTCATAGCAGTGAAGAAGCTTGAAAGCATAAGCCAAGGTGAGAAACAGTTTCGATCAGAAGTCAGTACCATAGGTACAGTCCAACATGTTAATCTTGTTCGTCTTCGTGGGTTCTGCTCTGAAGGAAGCAGAAAGCTTCTGGTTTATGATTACATGCCTAATGGCTCATTGGATGCCCATCTGTTTAAAGAAAAGAACTCCAAGAAATTAGAATGGAAATTAAGCGAAATGCAGACATTGAGGAGGTGA 591 0.4027 MCFLGPKQLSQDDSNGGTLYLKLAASEFSDAKRKNGEIIGIVVGTVGGLGVLLVILLFVIIRRRRRIVGKGKSVEGSLMAFGYRDLQNATKNFSEKLGGGGFGSVFKGTLSDSSVIAVKKLESISQGEKQFRSEVSTIGTVQHVNLVRLRGFCSEGSRKLLVYDYMPNGSLDAHLFKEKNSKKLEWKLSEMQTLRR 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1043 196 Pfam Protein tyrosine and serine/threonine kinase 93 189 IPR001245 GO:0004672|GO:0006468
Lele31g1043 196 Gene3D Phosphorylase Kinase; domain 1 59 165 - -
Lele31g1043 196 ProSitePatterns Protein kinases ATP-binding region signature. 97 120 IPR017441 GO:0005524
Lele31g1043 196 SUPERFAMILY Protein kinase-like (PK-like) 76 187 IPR011009 -
Lele31g1043 196 ProSiteProfiles Protein kinase domain profile. 91 196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g1043 196 PANTHER OS07G0415500 PROTEIN 16 187 - -
Lele31g1043 196 FunFam Serine/threonine-protein kinase 58 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1043 Lele-ChrLele31 17400011 17401178 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1043 29 186 Receptor kinase-like Gene Family AT1G56120 44.785 1.83e-33 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele31g1043 PK_Tyr_Ser-Thr 5.5e-16 CL0016