Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1040 ATGAAAGTGATAGCTAACAAATATGTCGACCGTGAAACACGTTTGGGATGTGCATATATACGACTGAATCCACGCAGTGACACGAATGGATTGAAGAAAGGCACGTGGACGCCAGAAGAAGACCGCAAGCTCATTGCTTACGTTACTAGGTATGGCTGTTGGAATTGGCGCCAAATCCCCAGGTTTGCAGTTCGCAGGTTTAGCAAGGTGTGGGAAGAGTTGCAGACTGAGGTGGCTCAATTACCTGAGGCCCGGCATCAAAAGAGGCAACTATACTCAGGAAGAAGACGACCTTATCATCAAACTCCACGGCCAGCTTGATGGTCTGCTATAGCGGCTAAGCTACCGGGAAGAACAGACAATGAGATAAAGAACCACTGGCATACCAACCTCAAGAACAAGCACCAAAGTCAACCTCAAAACAACTCTGTCCCAAATGACAAGAATGAAATGATCTCGAAGCCCAGCAACCATCATTCTCAAGGAATCACTGATTCAGTAACTTCGGGTGAATCCTCGGACATAACGACGACGTCGGAGAGTAACCAGGATGTGGTGGTCGGAGATTATGAGTTATCTTTTCTGGATGCATATAATGAGCCAGTGAGCGAAAATTTCTGGACAGACCCATTCTTTGTCGAATCTGACATTACCTGCTACCGCCATACAGAATTACTGTCACCCGCGGAGCTTGAAACTCAAGTTTTTACTCCAATGTTCAATATTGCACATCTTCGGACTCACAATAATTTCTGCAGCTAA 762 0.458 MKVIANKYVDRETRLGCAYIRLNPRSDTNGLKKGTWTPEEDRKLIAYVTRYGCWNWRQIPRFAVRRFSKVWEELQTEVAQLPEARHQKRQLYSGRRRPYHQTPRPAXWSAIAAKLPGRTDNEIKNHWHTNLKNKHQSQPQNNSVPNDKNEMISKPSNHHSQGITDSVTSGESSDITTTSESNQDVVVGDYELSFLDAYNEPVSENFWTDPFFVESDITCYRHTELLSPAELETQVFTPMFNIAHLRTHNNFCS 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1040 253 Gene3D - 96 154 - -
Lele31g1040 253 ProSiteProfiles Myb-like domain profile. 28 131 IPR001005 -
Lele31g1040 253 SMART sant 32 133 IPR001005 -
Lele31g1040 253 MobiDBLite consensus disorder prediction 119 182 - -
Lele31g1040 253 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 28 66 IPR017930 -
Lele31g1040 253 MobiDBLite consensus disorder prediction 132 182 - -
Lele31g1040 253 Pfam Myb-like DNA-binding domain 104 131 IPR001005 -
Lele31g1040 253 Pfam Myb-like DNA-binding domain 33 61 IPR001005 -
Lele31g1040 253 SUPERFAMILY Homeodomain-like 30 127 IPR009057 -
Lele31g1040 253 CDD SANT 35 131 IPR001005 -
Lele31g1040 253 Gene3D - 26 90 - -
Lele31g1040 253 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 24 183 - -
Lele31g1040 253 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 106 135 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1040 Lele-ChrLele31 17380108 17381202 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1040 24 218 MYB Transcription Factor Family AT1G06180 36.232 2.12e-23 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele31g1040 Myb_DNA-binding 2.1e-06 CL0123