Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1038 ATGGTGAGAACCCCATGCTACAACGGCCTCAGGAAAGGAACATGGACGGCAGAAGAAGACATGAAGTTGGTTGCCTATGTTACGAGGAAGGAGTCAAAAACTCAATTCCTTGTCATGGATTTGAACATATGTTATGACAGTCACACTTTGAAATGTCACTACTCATTACTGTTGAAAAGGTGGTCCAAGATTGCTACTGGTTTACCGGGAAGAACCGATAACGAAATAAAAAACCACTGGCACAACATTCTCAAGAAGAGGGTTCAAGAAAATTCAGTTGCGCGTGAAGAAGAAAAGGATCAAATTCCATTTGAATCAAGGCAAGAAGAGATAATCATCGACTCATCAGTCATCACTATCAGTACAACCACTGCTCCTTCTTCTTCACAATGTGATTCAGTAGCAGGCCAGTCCCAATTCTCAAGTGCCTTCCACAGATACTGA 444 0.4212 MVRTPCYNGLRKGTWTAEEDMKLVAYVTRKESKTQFLVMDLNICYDSHTLKCHYSLLLKRWSKIATGLPGRTDNEIKNHWHNILKKRVQENSVAREEEKDQIPFESRQEEIIIDSSVITISTTTAPSSSQCDSVAGQSQFSSAFHRY 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1038 147 CDD SANT 14 84 IPR001005 -
Lele31g1038 147 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 55 109 - -
Lele31g1038 147 ProSiteProfiles Myb-like domain profile. 7 84 IPR001005 -
Lele31g1038 147 Pfam Myb-like DNA-binding domain 12 84 IPR001005 -
Lele31g1038 147 SUPERFAMILY Homeodomain-like 53 95 IPR009057 -
Lele31g1038 147 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 88 IPR017930 -
Lele31g1038 147 Gene3D - 9 89 - -
Lele31g1038 147 SMART sant 11 86 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1038 Lele-ChrLele31 17366741 17368894 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1038 1 145 MYB Transcription Factor Family AT5G15310 30.682 5.77e-16 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele31g1038 Myb_DNA-binding 2.4e-11 CL0123