Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1036 ATGATGAGAGGCCCTTACTATGACAGAAATGGAGTAAAGAGAGGTGCGTGGAGTAAGAAAGAAGATGAAAGGTTAAGAGCCTATGTTGAGAGACACGGCCACACTAATTGGCGTCAACTCCCCAATCACGCAGGTTTATCGAGGTGCGGAAAGAGTTGCAGACTTCGATGGCTAAATTACCTGCGCCCGGATGTAAAGCGTGGGAATTACACCCAAGAAGAAGACGAACTCATCATCAAATTGCATGAACAACATGGAAATAAATGGTCTTCGATTGCCGAAAGATTACCGGGGAGAAGTGACAATGAGATTAAGAACCATTGGCATAGCCGCCTAAAGAAGCAGTTGGAGTGCAATCACGGAGGAAAATCTGAGTTCAAAATGAAACCTAGTGCTACTTGTGAAGGAGAAACATCAAAGTATTTCGAACTTGAAAGCCCTTTGCCTGCTTCCTCCAGCAATATTTCAGAAAGCTCACCACCCGGCTACACTTCATCTCCAACCCTTTCCTTCGGAGGAGATCAAAGCGTTGCTGATGCTGCATGGGAAATATTTGAAGAATTCGGAGATTTTTGGAGCCAACCATTTGTCCCAGAACATACATACGACCAGGATGACTATTATTATTATAGTCTGAACTATCCAGATGTGGACGAATATTCCTCAATCCTCATTGATAATACTGAGTTTTTGAGCCATGTCATGCAAGAATTTCAGGAAGATCCTTCAAAGGATATATAA 741 0.4291 MMRGPYYDRNGVKRGAWSKKEDERLRAYVERHGHTNWRQLPNHAGLSRCGKSCRLRWLNYLRPDVKRGNYTQEEDELIIKLHEQHGNKWSSIAERLPGRSDNEIKNHWHSRLKKQLECNHGGKSEFKMKPSATCEGETSKYFELESPLPASSSNISESSPPGYTSSPTLSFGGDQSVADAAWEIFEEFGDFWSQPFVPEHTYDQDDYYYYSLNYPDVDEYSSILIDNTEFLSHVMQEFQEDPSKDI 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1036 246 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lele31g1036 246 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Lele31g1036 246 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele31g1036 246 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 152 - -
Lele31g1036 246 FunFam MYB-related transcription factor 13 66 - -
Lele31g1036 246 Gene3D - 68 138 - -
Lele31g1036 246 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele31g1036 246 MobiDBLite consensus disorder prediction 148 170 - -
Lele31g1036 246 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele31g1036 246 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele31g1036 246 SMART sant 66 114 IPR001005 -
Lele31g1036 246 SMART sant 13 63 IPR001005 -
Lele31g1036 246 CDD SANT 16 61 IPR001005 -
Lele31g1036 246 Gene3D - 14 66 - -
Lele31g1036 246 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele31g1036 246 CDD SANT 69 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1036 Lele-ChrLele31 17348731 17350087 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1036 1 173 MYB Transcription Factor Family AT4G38620 51.724 2.39e-53 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele31g1036 Myb_DNA-binding 7.4e-15 CL0123