Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1035 ATGATCATGAGAGGCCCTTACTATGACAAAAATGGAATAAAGAGAGGTACGTGGAGTAAGGAAGAGGATGAAATGTTGAGAGCATATGTTGAGAGATGCGGCCACCGTAATTGGCGCCAACTCCCCAAACACTCAGGTTTAACAAGGTGTGGAAAGAGTTGCAGACTTCGATGGCTAAATTACCTTCGCCCGGGCATAAAGCGTGGAAATTACACCCAAGAAGAAGACCAACTCATCATCAAATTACATCAACAGCGTGGAAATCAGTGGGCTTCGATGGCCAAGCTATTACCAGGGAGAAGTGACAACGAGATTAAGAACCATTGGCATAGTCACCTAAAGAAGCAGTTGGAGTGCAATAATGCAGGAAAATCTGAGTTCAAAATGAAGGCAAGTGGTACTTGTGAGGGAGAAACAACCAAGTCTCTCGAACCTGAAAATCCTCAGCTTGGTCTTGCTTCTGCTTCCTCCAGTGATATCTCAGAAAGATCCCCACCCAGCTACAATTCATCTTCAACCTTTTCCTTCGGAGGAGAAAGCCCTGCTAATGATGCATGGGAAATCTTTGAAGATCTCGGCGATTTTTGGACCCAGCCATTTCTCCTAGAAAATATATATGACCAGTATAACTATTACAGTATGAACCATGCAGTAAATTTAGCAGATGTGGATGAATATTCCTCATACATCTTGGATAATGCTGCGTTTTTGCGCCAAGTGATGCAAGAAGATCCTAAAAAGGATATATAA 750 0.428 MIMRGPYYDKNGIKRGTWSKEEDEMLRAYVERCGHRNWRQLPKHSGLTRCGKSCRLRWLNYLRPGIKRGNYTQEEDQLIIKLHQQRGNQWASMAKLLPGRSDNEIKNHWHSHLKKQLECNNAGKSEFKMKASGTCEGETTKSLEPENPQLGLASASSSDISERSPPSYNSSSTFSFGGESPANDAWEIFEDLGDFWTQPFLLENIYDQYNYYSMNHAVNLADVDEYSSYILDNAAFLRQVMQEDPKKDI 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1035 249 Gene3D - 70 136 - -
Lele31g1035 249 FunFam Transcription factor RAX3 8 68 - -
Lele31g1035 249 MobiDBLite consensus disorder prediction 131 176 - -
Lele31g1035 249 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 4 174 - -
Lele31g1035 249 MobiDBLite consensus disorder prediction 135 176 - -
Lele31g1035 249 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
Lele31g1035 249 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Lele31g1035 249 CDD SANT 17 62 IPR001005 -
Lele31g1035 249 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Lele31g1035 249 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Lele31g1035 249 Gene3D - 15 67 - -
Lele31g1035 249 CDD SANT 70 113 IPR001005 -
Lele31g1035 249 SMART sant 67 115 IPR001005 -
Lele31g1035 249 SMART sant 14 64 IPR001005 -
Lele31g1035 249 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Lele31g1035 249 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 66 IPR017930 -
Lele31g1035 249 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1035 Lele-ChrLele31 17339824 17341105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1035 4 126 MYB Transcription Factor Family AT2G31180 60.000 3.09e-52 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele31g1035 Myb_DNA-binding 7.8e-14 CL0123