Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1034 ATGGGAAGATCACCTTGCTGCGACAAAAATGGCCTCAAGAAAGGTCCCTGGACCCCTGAAGAAGACGCCAAGCTCATTCATTACATTCAAACTCATGGCCCTAGCAATTGGCGCACCCTCCCCAAGAATGCAGCGGCTAGATTGCCTGGAAGAACCGACAATGAAATAAAGAACTACTGGAACACCCACATACGAAAGAGGCTTCTTCGAATGGGAATCGACCCTGTTACTCACGCCCCACGCCTCGATCTTCTCGACATATCTTCCATTCTTGGGTTGGTGTTGGGAATGGGGAACACGTCACTCTTGAATCTGCAGGGCTTGTTGGGAGCTCAGGCCTTGATGAACCCTGAATTGTTAAAGATGGCAACCACCCTGTTATCGCTGAAGAACGAAAACCCAGAACTGGTTTCACAGAATCTTCAGCAAATGATCCAACCTGCAGGCAATTCTCAAGTTCAAGCACAAGCCCCAATCGATCCCGCACCAGCACAGTTCAGTAACCAGTTTCAGATGCCAATGGAAACCAACAACGAGGAAGGATTCTCAGGGGATTTGACGACCATGGGATTCTCAGATTCCCAAGTTCAATCCTGTATGGCTGGGAAAATTGATCTGTTGCAACGAAACCAAGCTGAATTCCTGGGAGATCCTGGGTTCCTGCAAGACATGGGCTATGACTCTGCTTTGTCGACGCCGTCATCGAGTACAACCCCATTGAACTCGCCATCGACGCAAGTGAACAATAGCAGTGGGGAAGAGGAGAGAGATAGCTATTGTAGCGACTTGTTCAAGTTCGAAATTCCAGAGGATTTAGATCTTAGTAGTTACTTGCTGTAA 840 0.4821 MGRSPCCDKNGLKKGPWTPEEDAKLIHYIQTHGPSNWRTLPKNAAARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHAPRLDLLDISSILGLVLGMGNTSLLNLQGLLGAQALMNPELLKMATTLLSLKNENPELVSQNLQQMIQPAGNSQVQAQAPIDPAPAQFSNQFQMPMETNNEEGFSGDLTTMGFSDSQVQSCMAGKIDLLQRNQAEFLGDPGFLQDMGYDSALSTPSSSTTPLNSPSTQVNNSSGEEERDSYCSDLFKFEIPEDLDLSSYLL 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1034 279 PANTHER F14D16.11-RELATED 45 245 - -
Lele31g1034 279 SMART sant 13 66 IPR001005 -
Lele31g1034 279 CDD SANT 16 64 IPR001005 -
Lele31g1034 279 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 68 IPR017930 -
Lele31g1034 279 ProSiteProfiles Myb-like domain profile. 9 64 IPR001005 -
Lele31g1034 279 MobiDBLite consensus disorder prediction 225 255 - -
Lele31g1034 279 Gene3D - 11 70 - -
Lele31g1034 279 Pfam Myb-like DNA-binding domain 14 63 IPR001005 -
Lele31g1034 279 SUPERFAMILY Homeodomain-like 8 74 IPR009057 -
Lele31g1034 279 MobiDBLite consensus disorder prediction 227 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1034 Lele-ChrLele31 17305184 17306364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1034 1 279 MYB Transcription Factor Family AT4G21440 39.335 1.25e-63 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele31g1034 Myb_DNA-binding 1.6e-13 CL0123