Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1028 ATGCGTTGGTCTTCTTTCTACCAGACAGCTTCAAGGGCTTTTCATCAGTCTCCGTCCTGGTCCAAGGTTCTTGTCGTCTGCACTGTCAGTGGGGCAGGTTTCGTGGGATATGCTGATGCAGGAGCAGTTCAGAGCGAGAATGGTCCGAAGAAGAAGAAGGTGGTGGTGGTGGGAACAGGATGGGCTGGGACCAGTTTTGTGAAGAATTTGAAAAACCCTTCGTATGATGTGGAAGTAGTTTCACCTCGTAACTATTTTGCATTTACGCCTTTGCTTCCAAGTGTCACCGTCGGCACTGTGGAATCAAGAAGCATTGTTGAACCTATTCGCAAAATCATCAACAAGCAACAGAAGGACGTAAACGTTCAATTCACACAAGCTGAATGCTTTAAGATCGATGCCAAGAATCGGAAAGTGTACTGTCGTTCTACTGAAGACAGCAAAAATGGCAAACAAGAATTTTCTATTGATTATGACTACCTCGTTCTAGCCATGGGAGCCCGTTCTAACACATTTAACACCCCAGGTGTTGAAGAGTATACTCACTTCTTGAAGGAAGTGGAAGATGCTCAGAAAATCCGTCGGAAAGTGATTGAACTTTTCGAAAAGGCAAGCCTGTCATGTGTACCTGAAGAGGAGAAGAAGAAACTTCTGCATTTTGTGGTAGTTGGTGGTGGTCCGACTGGTGTAGAGTTTGCTGCAGAGCTTCATGACCATGTTCATCAGGATTTATACAAACTATATCCTTCTGCCAAAAACTACGTAAAGGTTACACTTTTGGAAGCAGGCGATCATATTCTGAACATGTTTGACAAGAGGATTACTGAGTTTGCTGAAGAAAAGTTCAAAAGAGAGGGCATCGATGTGAAGCTAGGTTCTATGGTTATAAAAGTGTCTGAGAATGAAATCAGTACAAAAGAAAGAGGAACGGGTAAGGTTGGATCTTTACCTTACGGAATGGTGGTTTGGTCAACTGGTATTGGTCCTCGTGCTGAAGCTGTTCAGTTTATGAAAGATACTGGTCAGGGTAATAGGCGTGCCATTAGCACAGATGAATGGTTAAGAGTTGAAGGAGTTGACAACATCTATGCCCTCGGAGATTGTGCCACTAAAAATCAATGTAGAGTTCTGGAAGATATAGCAGTGATATTTAACAAGGCAGACAAGAACAACCTCGGGAAATTGGATCTGGATCATTTTCAAGAGGTTGTTGGAGACATTATTGAGAGGTACCCACAAGTGGATATTTATCTAAAGAAGAAGCAAATGAGTAGCATAGTGGCACTAATGAAGAACTCTCAAGACAACAATACTCTTGTCGACATTGAAACATTCAAATCTTGTCTCTCTGAAGTAGATTCCCAGATGAAAAATCTTCCTGCAACAGCTCAGGTAGCTGCTCAACAACAACAAGGTGAGTATCTTGCAGACTGTTTCAATCGAATGGAGAAGTGTGAGAAATATCCTGAAGGACCCCTTAGGTTTAGAGGAACAGGACGTCATCGTTTTCGTCCCTTCAGGTACAAGCATTTCGGGCAATTTGCTCCGTTAGGAGGAGAACAAGCAGCAGCTCAGCTTCCGGGAGATTGGGTTTCAATCGGACATAGCACACAGTGGCTCTGGTATTCTGTATATGCAAGTGTGCTTTATGTCTCCTTCAATGGCTTCCTAAACTTGCAGCAAACAAGTGAGCTGGCGTACCAGGAAATTCACTGTTATCTTCATTGGATTTTTAGTGTTCTCCAAAACAACAATATTGCCGTTGCAAGTCAGTTTATCTTGTGTTTTGGTTCTCAGGTTGATGAAGTAAGATTCTAA 1818 0.4274 MRWSSFYQTASRAFHQSPSWSKVLVVCTVSGAGFVGYADAGAVQSENGPKKKKVVVVGTGWAGTSFVKNLKNPSYDVEVVSPRNYFAFTPLLPSVTVGTVESRSIVEPIRKIINKQQKDVNVQFTQAECFKIDAKNRKVYCRSTEDSKNGKQEFSIDYDYLVLAMGARSNTFNTPGVEEYTHFLKEVEDAQKIRRKVIELFEKASLSCVPEEEKKKLLHFVVVGGGPTGVEFAAELHDHVHQDLYKLYPSAKNYVKVTLLEAGDHILNMFDKRITEFAEEKFKREGIDVKLGSMVIKVSENEISTKERGTGKVGSLPYGMVVWSTGIGPRAEAVQFMKDTGQGNRRAISTDEWLRVEGVDNIYALGDCATKNQCRVLEDIAVIFNKADKNNLGKLDLDHFQEVVGDIIERYPQVDIYLKKKQMSSIVALMKNSQDNNTLVDIETFKSCLSEVDSQMKNLPATAQVAAQQQQGEYLADCFNRMEKCEKYPEGPLRFRGTGRHRFRPFRYKHFGQFAPLGGEQAAAQLPGDWVSIGHSTQWLWYSVYASVLYVSFNGFLNLQQTSELAYQEIHCYLHWIFSVLQNNNIAVASQFILCFGSQVDEVRF 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1028 605 SUPERFAMILY FAD/NAD(P)-binding domain 219 373 IPR036188 -
Lele31g1028 605 ProSiteProfiles EF-hand calcium-binding domain profile. 375 410 IPR002048 GO:0005509
Lele31g1028 605 SUPERFAMILY FAD/NAD(P)-binding domain 51 271 IPR036188 -
Lele31g1028 605 PRINTS FAD-dependent pyridine nucleotide reductase signature 347 369 - -
Lele31g1028 605 PRINTS FAD-dependent pyridine nucleotide reductase signature 158 176 - -
Lele31g1028 605 PRINTS FAD-dependent pyridine nucleotide reductase signature 54 73 - -
Lele31g1028 605 PRINTS FAD-dependent pyridine nucleotide reductase signature 219 237 - -
Lele31g1028 605 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 42 404 - -
Lele31g1028 605 Gene3D - 409 558 - -
Lele31g1028 605 Gene3D - 42 407 - -
Lele31g1028 605 PANTHER NADH DEHYDROGENASE 44 550 IPR045024 GO:0003954|GO:0006116
Lele31g1028 605 SUPERFAMILY EF-hand 331 451 IPR011992 -
Lele31g1028 605 Pfam Pyridine nucleotide-disulphide oxidoreductase 52 372 IPR023753 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1028 Lele-ChrLele31 17264485 17267698 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1028 1 547 Chloroplast and Mitochondria Gene Families AT4G21490 65.889 0.0 731
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0517 29 3136950 3139833 Lele31g1028 31 17264485 17267698 hybridization
Lele30g0893 30 12801550 12808914 Lele31g1028 31 17264485 17267698 hybridization