Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1017 ATGGGCTCCATGCCACGTTGGGGACAGCTATGTCCTATGGAGGCGACAGATGAAGGTGGACAACATGGGATAGTAAAGGACCGCCTACCTCTTCTTAGTCTTTGGTCTTCCTATTTTCTTCATTCTCAATTTCTTCGCTTTGCCTTCTCTTTCCCCATCCCTGTCACTGGACCTACTTTCGTTTTTGCTTGTGGAGCGTGTACTGAATTTACTCTCGATCCATTTTCGTTCACTTTCCCAGCATTTGCTGAAATTTTCAGCTCCTCACTTGCTCTGCGAGTTCATTTTGATCTTGGATTCCGTCCTCACTCTTCAGTCATATCTGGTTTTAAGTATAAAGGAGCGAAGATCTATGGACAAGTTTTATTGGGATTCATGTTGATCTGCACGATTCAGTTTTCACTGGCGGACACGAATCCTACTGACGTTTCTGCAATAAATAGTTTATATGCTGCGCTGGGCTTCCCTGTTCTCCCTGGGTGGGTTCCAAGTGGGGGAGACCCGTGTGGACAAGCATGGCAAGGCATTCAGTGTAATGGTTCAGATATACAGTCAATAGTTCTGGTCGGTGCAAATTTGGGAGGCGAACTGGGTGATAGCTTGGGAACGTTTGCTTCTATAAAGAAAATAGATCTAAGCAACAACCACGTTGGCGGAAGTATTCCAACCAGCTTGCCAGTCTCCTTGCAAAGTTTTTTTCTTTCAGATAACCAGTTTACTGGAAGTATTCCAACCTCTTTATCTACGTTGACTGAGTTGACAGTCATATCTTTTAATGACAATCGATTATCAGGAGAAATCCCGGATATATTTCAATCACTCACAAAATTGGTTAATCTAGATTTAGCGAATAACAATTTTAGTGGGGAACTGCCTCCATCTGCAGAGAATTTGTCAGCTTTGGCCTCCCTACATTTGCAGAGCAATAAACTATCTGGGACCCTTGATGTTTTACAAGACCTTCCACTGAGTGATTTGAATATAGAGAACAACCAATTCAATGGACCAATTCCTCAAAAGCTTCTAAGCATCCCAAATTTCAGACAAGATGGAAACCCATTTAATGTTGTTAATGGTACTACAGTTTCAGCCCCTCCATCTCTTTCTCCAGTAACAACATCACCAGGAACTGTGGTTTCTGGGGCCCCAACTACTGGACATGTCCCTACTACTAAACCGGCTGAAGGACCAACTGCATCAAAGGAATCAAATTCTGGAAAAGCAAGAAAGAACACCAAAAGGGTGGTTTGGATATCTATTGCAAGTGTATTAGGATTTATTATTTTGGTGTTGGCACTCCTTCTCTTTGCTCCAAGATGTAGCAGAAGGGAAAGGGATGGCAGAAGAATTTCTAAGCAATACCAAATGGGAGCATATGGAGATGACAGCCACAATCATAGGAATCATGGGACTTCAGTCCAACCACCCAGTCAAACTGAGAAAGTACCAAACGGGGCTGTTCTGAGAACAAAAGAAGATCATCAAGCAGAGACCAGGAGAGTAGAAGCTATTCCCAGGTCACAATATGAGCAAGAGCAAGATGTGCGAAGAATGGGAACATTACCCAAGCGGGATGATCATGAGATAGATATGAGTGCACTAGATGTGTACTCACTGCCTCCTCCCTCTCCCCCTTCCCCTACCCCTCCGCCTCCGCCTCCCCCTCCCCCTCCCCCTCCACCCCCACCCCCACCCCCACCACCTGATGAGAAGGTGACTGCTGAGCCAATTCCTTTCCAACGAGGGGCTACAGTCAATCCTTCTGTGAAAAAGCCAGTTTCTCCCACTTTTGCAAAATCTTTCACTATTGCATCCCTTCAACAGTATACGAACAGCTTTTCTCCCGAAAACCTTATAGGAGGAGGCATGCTGGGGAATGTGTATAGGGCAGAGCTACCTGATGGGAAGCTATTTGCTGTGAAGAAACTGGACAAAAGAGCTTCTGAACATCAAAAGGATCACGAATTTCTTGAACTAGTAAACAGTATTGACAGAATCAGGCACGCAAATATTGTTGAGCTTATTGGTTACTGTGCTGAGCATGGCCAAAGGCTTCTGATCTATGAGTACTGCAGTAATGGGTCACTGCAGGATGCACTGCATTCAGATGATGAGCTCAAAACCAGATTGTCATGGAATGCTCGCATTCGGATAGCCCTTGGGGCAGCCAGGGCCTTAGAGTATTTACATGAGATCTGCCAACCTCCTGTTGTGCACAGAAATTTCAAGTCTGCCAATATTCTACTTGATGATGATCTATCTGTGCGTGTTTCGGATTGTGGTTTGGCTCCCTTGATAGCTTCAGGTTCCGTAATTCAGCTCTCGGGGCAACTGCTAACAGCTTATGGCTATGGAGCTCCAGAATTTGAGTCTGGAATTTACACGCACCAGAGTGATGTGTACAGTTTTGGAGTGGTTATGTTAGAACTATTGACAGGCCGCCAATCCTATGACAGGACACGCTCTCGAGGAGAGCAATCTCTAGTTAGATGGGCAATTACTCAACTACATGACATTGATGCCTTATCAAATATGGTAGATCCTTCTCTCAATGGAGACTACCCAGCCAAATCATTGTCAAACTTTGCAGACATTATTTCTCAGTGTGTTCAGTCGGAGCCAGAATTTAGGCCACCTATGTCAGAGGTTGTTCAATATCTACTAGATATGATAAGGAAGGAATCTCACAGAAGTGGATCAAATGAAGACTGA 2712 0.4458 MGSMPRWGQLCPMEATDEGGQHGIVKDRLPLLSLWSSYFLHSQFLRFAFSFPIPVTGPTFVFACGACTEFTLDPFSFTFPAFAEIFSSSLALRVHFDLGFRPHSSVISGFKYKGAKIYGQVLLGFMLICTIQFSLADTNPTDVSAINSLYAALGFPVLPGWVPSGGDPCGQAWQGIQCNGSDIQSIVLVGANLGGELGDSLGTFASIKKIDLSNNHVGGSIPTSLPVSLQSFFLSDNQFTGSIPTSLSTLTELTVISFNDNRLSGEIPDIFQSLTKLVNLDLANNNFSGELPPSAENLSALASLHLQSNKLSGTLDVLQDLPLSDLNIENNQFNGPIPQKLLSIPNFRQDGNPFNVVNGTTVSAPPSLSPVTTSPGTVVSGAPTTGHVPTTKPAEGPTASKESNSGKARKNTKRVVWISIASVLGFIILVLALLLFAPRCSRRERDGRRISKQYQMGAYGDDSHNHRNHGTSVQPPSQTEKVPNGAVLRTKEDHQAETRRVEAIPRSQYEQEQDVRRMGTLPKRDDHEIDMSALDVYSLPPPSPPSPTPPPPPPPPPPPPPPPPPPPPDEKVTAEPIPFQRGATVNPSVKKPVSPTFAKSFTIASLQQYTNSFSPENLIGGGMLGNVYRAELPDGKLFAVKKLDKRASEHQKDHEFLELVNSIDRIRHANIVELIGYCAEHGQRLLIYEYCSNGSLQDALHSDDELKTRLSWNARIRIALGAARALEYLHEICQPPVVHRNFKSANILLDDDLSVRVSDCGLAPLIASGSVIQLSGQLLTAYGYGAPEFESGIYTHQSDVYSFGVVMLELLTGRQSYDRTRSRGEQSLVRWAITQLHDIDALSNMVDPSLNGDYPAKSLSNFADIISQCVQSEPEFRPPMSEVVQYLLDMIRKESHRSGSNED 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1017 903 MobiDBLite consensus disorder prediction 469 484 - -
Lele31g1017 903 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 180 887 - -
Lele31g1017 903 ProSiteProfiles Protein kinase domain profile. 613 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g1017 903 MobiDBLite consensus disorder prediction 363 387 - -
Lele31g1017 903 Gene3D Ribonuclease Inhibitor 140 390 IPR032675 -
Lele31g1017 903 SUPERFAMILY L domain-like 139 346 - -
Lele31g1017 903 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 691 901 - -
Lele31g1017 903 Gene3D Phosphorylase Kinase; domain 1 582 690 - -
Lele31g1017 903 Pfam Protein tyrosine and serine/threonine kinase 617 887 IPR001245 GO:0004672|GO:0006468
Lele31g1017 903 Gene3D Transferase(Phosphotransferase) domain 1 691 903 - -
Lele31g1017 903 SUPERFAMILY Protein kinase-like (PK-like) 589 887 IPR011009 -
Lele31g1017 903 MobiDBLite consensus disorder prediction 458 574 - -
Lele31g1017 903 MobiDBLite consensus disorder prediction 363 409 - -
Lele31g1017 903 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 139 366 - -
Lele31g1017 903 MobiDBLite consensus disorder prediction 486 532 - -
Lele31g1017 903 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 580 690 - -
Lele31g1017 903 MobiDBLite consensus disorder prediction 538 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1017 Lele-ChrLele31 17192777 17201688 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1017 133 899 Strubbelig Receptor Gene Family AT4G03390 61.776 0.0 877
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lele31g1017 PK_Tyr_Ser-Thr 2e-43 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele31g1017 31 17192777 17201688 Lele09g0857 09 6868350 6871529 CCT
Lele31g1017 31 17192777 17201688 Lele10g0788 10 6258608 6259357 CCT
Lele31g1017 31 17192777 17201688 Lele11g0867 11 8697295 8697999 CCT
Lele31g1017 31 17192777 17201688 Lele12g0475 12 12721620 12723573 CCT
Lele29g0529 29 3201384 3207569 Lele31g1017 31 17192777 17201688 hybridization
Lele30g0882 30 12732515 12739577 Lele31g1017 31 17192777 17201688 hybridization