Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1005 ATGCAGTGGTTGCTGCATGATTGGAGCGACGAAGATTGCATAAAGATACTGAAGACCTGCAAGAAAGCAATAGCACAAGAGAAAGGGAAGGTGATAATAGCAGAGTTTGTGCTGAAGCCAGAGGGCAAAGGCTTGTTCGACGACATAGGTTTGCTCTTCGACTTGCTCATGATTGCTCATTCCTCCGGCGTAAAAGAGAGGACCGAATCTGAGTGGAAGAATCTCTTACTCCAAGCTGGATTCCCTCGCTATCAGATCATCAACACACACTCTTTCTTATCCATCCTTGAGGCTTACCCTATCTCATCATTCTCACCATCCGCCTACCAAATAACCCTATTTCACAACGCATCCAATTATTGCTTCTTCTCTCTTGTCTTGTCCTATGTTTTTACTTGTTTTCTTACGCAAATTTATCGTTACTGA 426 0.4343 MQWLLHDWSDEDCIKILKTCKKAIAQEKGKVIIAEFVLKPEGKGLFDDIGLLFDLLMIAHSSGVKERTESEWKNLLLQAGFPRYQIINTHSFLSILEAYPISSFSPSAYQITLFHNASNYCFFSLVLSYVFTCFLTQIYRY 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1005 141 Gene3D Vaccinia Virus protein VP39 1 101 IPR029063 -
Lele31g1005 141 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 100 IPR016461 GO:0008168
Lele31g1005 141 Pfam O-methyltransferase domain 1 81 IPR001077 GO:0008171
Lele31g1005 141 PANTHER O-METHYLTRANSFERASE 1 85 IPR016461 GO:0008168
Lele31g1005 141 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 99 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1005 Lele-ChrLele31 17116982 17117407 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1005 1 97 Monolignol Biosynthesis Gene Families AT1G77520 48.485 8.48e-23 90.5