Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1004 ATGAGGCTCCTCGTCCGCCGCAACATCTTCACCGCTCACCACCCCACCGACGGCCGGCCTCACCCCCTCTACCCGCTGGCTTTTTCTGGGAGTTGGCATCGAGGATTGCTTAAAGATACTGAAGATCTTCTAGAATTGCAAGAAGGCGATAGCGGAAGAGAAAGGGGAGGGGATGATAGCGGAGTTTGTGCTGAAGCCGAGGGGAGACGCATAGGTTTGGTCACCGATTTGCAGATGATTGCACATTCGTCAGGTGGAAAAGAGAGGACTGAATCTGAGTGGGAGAATCTCTTAAACCAAGCTGACTTCCCTCGTTATAGAATCATCAACACTCCCTCTTTCTTATCCATCATTATCAATGGATTCTTCCAAGTTTCACTCTTAACTACAAGCACAGAGAGAGAGAGAGAGAGAGAGATGGGAGAATATGCTAATGGAGAGGAGGCACTGACATTACAAGGTCAAGTTCATATATGGAAGAGCATCTTCAGTTTTGTAGATTCCATGTCACTCAAATCCGCCGTGGAGCTCCATATTCCGGATATTATACACCGCCACGGCGGACCAATCTCCTTGTCCCAGATCACCGCCTCTCTCTCCGACGCTCCTTCTCCTGACCCCACCTCCCTCGCCCGCATCATGAGGCTCCTCGTTCGCCGTAACATCTTCACCGCCCACCACCCATCAGATGGAGGAGACACCCTCTACGGCCTCACCCCCTCTTCCCGCTGGCTTCTTAGTGACTCAGACTTGAACCTCGTTCCCGCGCTTCTTATGCAGAACCACCCCATCCTTCTGGCTCCGTGGCACTATCTGAGTAATTGCGTGAGAGAAGGTGGCCTGGCGTTCAACAAGGCTCATGGCCGGGAGATATGGGAGTTAGCATCGGAGAGCCCAGAGTTCAACAAGCTGTTCAATGACGGGATCGCGTGTACGGCGAGGCTGCTGGGGAGGGCGGTCGTATCGGCGTACAAGGAAGGGTTCGAGAGCATTGGATCGTTGGTGGACTTGGGAGGGAACATCGGAGGGACGGCGTCGGAGATAGTGAAAGCGTATCCGCACATAAAGTGCATCAACTTCGATCTTCCTCATGTGATCGCCACTGCACCTGAATACGACGGAGTCACCCACGTCGGAGGAGACATGTTCCACTCCATCCCTCCTGCTGATGCGGTTTTCATGAAGTGGATACTGCACGATTGGAGCGACGAAGACTGCATAAAGATACTAACGAATTGCAAGAAGGCGATAGCTGAAAAGAAAGGGAAGGTGATAATAGCAGAGTTTGTGCTGAGACCAGATGGAACAGACTTGTTCGACGACATAAGCTTGGTCACCGATTTGCTGATGATTGCACATTCTTCAAGGGGAAAAGAGAGGACTGAATCGGAGTGGAAGAATCTCTTGAACCAAGCTGGCTTCCCTCGTTATCGAATCATCAACACTCCCTCTTTCTTATCCATCCTTGAGGCTTCCCCGTTCTGA 1485 0.5165 MRLLVRRNIFTAHHPTDGRPHPLYPLAFSGSWHRGLLKDTEDLLELQEGDSGRERGGDDSGVCAEAEGRRIGLVTDLQMIAHSSGGKERTESEWENLLNQADFPRYRIINTPSFLSIIINGFFQVSLLTTSTEREREREMGEYANGEEALTLQGQVHIWKSIFSFVDSMSLKSAVELHIPDIIHRHGGPISLSQITASLSDAPSPDPTSLARIMRLLVRRNIFTAHHPSDGGDTLYGLTPSSRWLLSDSDLNLVPALLMQNHPILLAPWHYLSNCVREGGLAFNKAHGREIWELASESPEFNKLFNDGIACTARLLGRAVVSAYKEGFESIGSLVDLGGNIGGTASEIVKAYPHIKCINFDLPHVIATAPEYDGVTHVGGDMFHSIPPADAVFMKWILHDWSDEDCIKILTNCKKAIAEKKGKVIIAEFVLRPDGTDLFDDISLVTDLLMIAHSSRGKERTESEWKNLLNQAGFPRYRIINTPSFLSILEASPF 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1004 494 PANTHER O-METHYLTRANSFERASE 152 476 IPR016461 GO:0008168
Lele31g1004 494 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 72 118 IPR029063 -
Lele31g1004 494 SUPERFAMILY "Winged helix" DNA-binding domain 150 249 IPR036390 -
Lele31g1004 494 Pfam Dimerisation domain 169 218 IPR012967 GO:0046983
Lele31g1004 494 Gene3D Vaccinia Virus protein VP39 247 492 IPR029063 -
Lele31g1004 494 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 159 493 IPR016461 GO:0008168
Lele31g1004 494 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 250 491 IPR029063 -
Lele31g1004 494 FunFam O-methyltransferase family protein 247 492 - -
Lele31g1004 494 Gene3D - 140 245 IPR036388 -
Lele31g1004 494 Gene3D Vaccinia Virus protein VP39 44 119 IPR029063 -
Lele31g1004 494 Pfam O-methyltransferase domain 269 474 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1004 Lele-ChrLele31 17106703 17110073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1004 169 490 Monolignol Biosynthesis Gene Families AT5G54160 41.159 1.50e-82 258