Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0980 ATGTTCACTGAGTCTTCATCATCTACCTTCCCTTCTCTCCAAGTTCTTTTTTCATGGGAAAAAAAAGCATTTAAAAAGGACCTCACTTGTTGCTCTTCTCTACCTTATCATCTCCCTTCTTCACTCGACAACTACACCGCGCTCTGTGTCTGCAACACAAACTTCAAATCTTCTAACATCTTCCTCTGTGGAAACTCTTCTATTCAGTCATCCATTCTCGTTCTTACCAATCGAAGTTTCTTCTCCATAAGCCGAGCTTTTTACTCTTACAAAATACCCACTAAGGCACCTAACTCTTCTTCTACCCTTCTTCCCTTTGCAACTTCCTTCATTTTCTCTATTGCTCCCATTAAGCATTTTCTCATTGGTCAAGGCTTCGTCATATTCTCACCTACTAGGGGCTTCAACGGCACGACCTCATCTCAGTACATTGGCCTTTTGAATTTCACTAATCAAGGTAATCCTCAAAACCATGCTTTTGGAGTTGAGTTTGATGTCAGAAAGAATGTAGATAAGAGATTACCAAGAGATTATTGCAGCAACAAGTGGGTTCTCATAAGAGAAGGTGATAGGAATAGGAGATTGAAACACAGAAATCTGGTGAACTTCAGAGGTTGGTGCAAAAGAGAAAAAGGAAGTTTCATATTAGTCTATGATTACATGGAGAATGGAAGTTTAGACAAATGGATCTTTGAAAGTGAGGAAGAAGAAGAAGAAGAAGAAGATAGAAGAAAGATGCTGACTTGGGAGGAGAGGATTCAAGTTCTAAAGAATTTACACTGTGCTCTTGATGAAAGGTTGAAGGCCAAAGGAGGATGTGTGATTGAGGAAGTGGAAAGAATGATTCGTTTGGGTTTGCTTTGTGCAAGTTCTGACCCTAATGTTAGGCCTACAATGAGGCAAGTGGTTAATATGCTGGAAGGAGAATTTGAAGGCAATAATATGACCGAACAGAACAGTGAGGGAGAGAATTTGCTTGAGAAAATAAAATCAGCAGCAATGTGGTCTGAAACTGCTCTAGCTTTTTCTAACGCAAGACACCCAACATTTGATGACTTGATGTTGAGTTCTTATTCTAAAACTTCTGCAAGTAACTCATATGCCATCCCAGATTCAGATATCATCCTAGAAGAAGGAAGATAG 1143 0.3955 MFTESSSSTFPSLQVLFSWEKKAFKKDLTCCSSLPYHLPSSLDNYTALCVCNTNFKSSNIFLCGNSSIQSSILVLTNRSFFSISRAFYSYKIPTKAPNSSSTLLPFATSFIFSIAPIKHFLIGQGFVIFSPTRGFNGTTSSQYIGLLNFTNQGNPQNHAFGVEFDVRKNVDKRLPRDYCSNKWVLIREGDRNRRLKHRNLVNFRGWCKREKGSFILVYDYMENGSLDKWIFESEEEEEEEEDRRKMLTWEERIQVLKNLHCALDERLKAKGGCVIEEVERMIRLGLLCASSDPNVRPTMRQVVNMLEGEFEGNNMTEQNSEGENLLEKIKSAAMWSETALAFSNARHPTFDDLMLSSYSKTSASNSYAIPDSDIILEEGR 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0980 380 Gene3D Transferase(Phosphotransferase) domain 1 261 325 - -
Lele31g0980 380 PANTHER - 193 263 - -
Lele31g0980 380 Gene3D Transferase(Phosphotransferase) domain 1 184 260 - -
Lele31g0980 380 Pfam Protein tyrosine and serine/threonine kinase 185 243 IPR001245 GO:0004672|GO:0006468
Lele31g0980 380 SUPERFAMILY Concanavalin A-like lectins/glucanases 52 175 IPR013320 -
Lele31g0980 380 Pfam Legume lectin domain 53 170 IPR001220 GO:0030246
Lele31g0980 380 Gene3D - 51 183 - -
Lele31g0980 380 SUPERFAMILY Protein kinase-like (PK-like) 172 264 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0980 Lele-ChrLele31 16986089 16987690 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0980 128 263 Receptor kinase-like Gene Family AT4G04960 39.706 4.35e-20 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele31g0980 Lectin_legB 3.4e-17 CL0004