Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0975 ATGGTATGCCTGAGATTTGACATGGTTGCCGGTAGAAGATTGGGTTTATGGCTAAGTAAGAGAAGGGGATCAGGGTTTCTATTGCAGGTTGCGTTTTGTTGGTGGGCTGTTCTGTTGTTTACTCGTCCCGTGGCGGGTCTGAGACCTCTGAGGGAGAGAATTCGACCGTGGGGCGATGAGTGGCTAGTCACAACAAAAGTGGAAAGTGAACTAGGTCCATTTTCACAATGGAACATAACAGGAACATACAAAGGAACATGGAAATTTTTAGATACCACCAATGGCTCTTCCAGGTTTCCTGACATCAGAAAAACAGATGGCAATACTGTAATTGAATTAGTTAGTACACCCTCAAAAATAAAGGGTGTGCATTATGTGCAGGGAGTAGTTATATTCCATGATGTGTTTGACAATGAGTACAATGTCGGCGGAGCTCAAATCAGAGTAGAAGGTGTATATATATGGCCTTTTAGACAGCTTCGAATGGTAGCCAGCAGTGGAAAAGAGGGAGAGTTAAATCTGGGTGAAGATAATATTTTGTCTAATCCATATCATCTGCTTGGAGTATTCTCATCCCAAGTATTCCAAGAATCTTCACGAGATAAGATGTGGAGAAGAAAACATTCTCGAATATATGATGTGGAGAAACGTTGCAATTTTGAAATTGCTGCACAAATTTCACGACTGTCATCATCAAAAAATGATGGGGATCGGGACCTTTTCCATCTTGAAGGGCTAACAGAGAGTCCCTCAACTGATGATGATGGGGACTGCTTCTCACCTTTACTACTAAATGCAACTTCTGTTAACATCGAGGTCTACTATAACAAAGCAGTGAACTACACATTGATGGTTACCTTTGTGTCTTTTGTGCAAGTTCTCTTATTGATTCGACAAATGGAGCATGGCAACACTCAATCTGGAGCTGCCAAGGTTTCAATTTTTATGATTGGCCAACAGGCAATCATGGATGCTTATCTTTGCCTATTACATCTGACTGCTGGGATACTAATTGAGTCTTTGTTCAATGCTTTTGCAACTGCTGCTTTTTTCAAGTTTGTGGTCTTCTCAATATTTGAGATGAGATATCTCCTTGCCATATGGAAGGCGAGTAGGCCTTTCAACAATGGGGAAGGTTGGGAAACAATGAGACGGGAGCTTTCAGTTTTATACAGTCGTTTCTATGGGATCCTATTGGGAGGCATTTTGCTCATGTATGAGTTTTATACTTGTTGGAGGCCTATTGTTCTTCTTATGTACTCCTTTTGGATACCTCAAATTATCACCAATGTTGTTCGTGATTCGCGCAAACCATTGCATCCTCAGTATATCCTAGGGATAACCATCACTCGGCTAGCAATCCCATTATATCTTTTCGGTTGCCCTAACAATTTCATGCGCATCGAACCACACAAGAACTGGTGTATTTGTTTGTTTGTATTTGTTGGATTTCAAGCCGGGGTTCTTTTACTTCAGCACTACCTTGGATCCCGTTGGTTCATTCCTCGACAGATTCTACCAGAGAAATACAGCTATTATAGGAGGGTTGATCAAGGCAGAAGTCATGCTTCTGACTGTGTTATTTGCATGGCGGCCATTGATTTTTCTCAGAGATCCAATGAATGCATGGTAACACCCTGCGATCATTTCTTCCACTCTGGTTGTTTGCAAAGATGGATGGATATAAAGATGGAGTGTCCGACTTGCCGCCGGCCCCTGCCTCCGACATAG 1731 0.4211 MVCLRFDMVAGRRLGLWLSKRRGSGFLLQVAFCWWAVLLFTRPVAGLRPLRERIRPWGDEWLVTTKVESELGPFSQWNITGTYKGTWKFLDTTNGSSRFPDIRKTDGNTVIELVSTPSKIKGVHYVQGVVIFHDVFDNEYNVGGAQIRVEGVYIWPFRQLRMVASSGKEGELNLGEDNILSNPYHLLGVFSSQVFQESSRDKMWRRKHSRIYDVEKRCNFEIAAQISRLSSSKNDGDRDLFHLEGLTESPSTDDDGDCFSPLLLNATSVNIEVYYNKAVNYTLMVTFVSFVQVLLLIRQMEHGNTQSGAAKVSIFMIGQQAIMDAYLCLLHLTAGILIESLFNAFATAAFFKFVVFSIFEMRYLLAIWKASRPFNNGEGWETMRRELSVLYSRFYGILLGGILLMYEFYTCWRPIVLLMYSFWIPQIITNVVRDSRKPLHPQYILGITITRLAIPLYLFGCPNNFMRIEPHKNWCICLFVFVGFQAGVLLLQHYLGSRWFIPRQILPEKYSYYRRVDQGRSHASDCVICMAAIDFSQRSNECMVTPCDHFFHSGCLQRWMDIKMECPTCRRPLPPT 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0975 576 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 513 576 IPR013083 -
Lele31g0975 576 PANTHER RING ZINC FINGER PROTEIN 136 575 - -
Lele31g0975 576 Pfam Ring finger domain 525 570 IPR001841 -
Lele31g0975 576 ProSiteProfiles Zinc finger RING-type profile. 526 570 IPR001841 -
Lele31g0975 576 FunFam E3 ubiquitin-protein ligase, putative 512 576 - -
Lele31g0975 576 SMART ring_2 526 569 IPR001841 -
Lele31g0975 576 SMART ringv_2 525 570 IPR011016 GO:0008270
Lele31g0975 576 SUPERFAMILY RING/U-box 525 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0975 Lele-ChrLele31 16943094 16950841 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0975 520 575 C3H Transcription Factor Family AT2G35420 35.714 1.58e-07 51.2