Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0968 ATGGGTGACGTAAGGCAGACCGCCCATGGAGTTGAGTTGCTTGCAAATCTAGAAAAGATACGGTGGATTCCACGACTTATTGATTTACTGGCTGGGGCCATGCATCTGCCACACTGGTATGTGGCCTTTGTCGTTGATGGTTGGGCTCTTGAGATTGCGCTTAATCACTGCCGGAAAGCTTTTACTGAGCTTGCCATACTGTCAAGGACTGCTATATGTTGCCGTGTGACACCATCGCAAAAAGCACAGCTTGTAGAGCTTTTAAAATCATGTGATTATAGAACACTGGCAATTGGTGATGGTGGAAATGATGTAAGGATGATACAAACAGCTGACATAGGTGTCGGCATTAGTGGAAGAGAAGGGTTGCAAGCAGCAAGAGCAGCTGATTACAGTGTTGGAAAAGATGTCATCTGCTCTTTGGTGATGATTATATCTGTTAATTTGCAGAGTTCAGGGGTCTCTGGAACCAGCCTTTTCAATTCTGTTAGCTTGATGGCTTATAATGTTTTCTGCACTAGTGTTCCTGTACTAGTCAGCGTGCTTGACAAAGATCTTGGTGAAGAAACTGTGATGCAGCATCCCCAAATTTTATTTTATTGCCAAGCTGGGAGGCTTCTAAACCCGAGTACATTTGGTGGATGGTTTGGGCGATCTCTCTTTCATGCAACAGTAGTATTTGTGATAACCATACATGCCTATGCTCCTGAGAAAAGTGAAATGGAGGAGGTCTCGATGGTTGCGCTCTCTGGTTGTGTATGGTTGCAGGTTTTTGTGGTTGCAGTGGAGACCAATTCCTTTACAATATTGCAACATCTTGCTATATGGGGGAATTTGGCTGCCTTTTATATCATCAACTTCATCTTCAGTGCCATTCCTTCGTCAGGGATGTATACAATTATGTTTCGGTTGTGCCAACAACCATCATATTGGATAACAGTATTTCTTACATTAGCAGCTGGGATGGGTCCAATTCTAGCCATCAAGTACTTCAGATTTACTTATAGACCAAGCAAAATAAATACCCTTCAGCAAGCTGAACGTCTGGGTGGAGCAATTTTGTCTCTGGGCACAATTGAGCCCCCATCCAGATCCATAGAGAAAGATGTCTCTTCACTGTCAATAACACAGCCCAAAAACAGAAGTTCTGCGTATGAACCTCTCTTATCGGATTCTCCAAATGCCACCAGAAGGTCTCTTGGAGCAGCAGCCCCATTTGATTTTTTTCCAATCTACGTCGTCGTGATTATCGCTATCTAGATGCACTCACTCGCTGAGTGTCGGCAGTCTCCTCTCCTTTCAACTCACAAGTCACAAGCATAG 1323 0.4399 MGDVRQTAHGVELLANLEKIRWIPRLIDLLAGAMHLPHWYVAFVVDGWALEIALNHCRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQTADIGVGISGREGLQAARAADYSVGKDVICSLVMIISVNLQSSGVSGTSLFNSVSLMAYNVFCTSVPVLVSVLDKDLGEETVMQHPQILFYCQAGRLLNPSTFGGWFGRSLFHATVVFVITIHAYAPEKSEMEEVSMVALSGCVWLQVFVVAVETNSFTILQHLAIWGNLAAFYIINFIFSAIPSSGMYTIMFRLCQQPSYWITVFLTLAAGMGPILAIKYFRFTYRPSKINTLQQAERLGGAILSLGTIEPPSRSIEKDVSSLSITQPKNRSSAYEPLLSDSPNATRRSLGAAAPFDFFPIYVVVIIAIXMHSLAECRQSPLLSTHKSQA 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0968 440 SUPERFAMILY Calcium ATPase, transmembrane domain M 139 337 IPR023298 -
Lele31g0968 440 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 41 135 - -
Lele31g0968 440 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 64 179 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele31g0968 440 Pfam Phospholipid-translocating P-type ATPase C-terminal 131 338 IPR032630 -
Lele31g0968 440 Gene3D - 12 137 IPR023214 -
Lele31g0968 440 SUPERFAMILY HAD-like 39 143 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0968 Lele-ChrLele31 16895987 16901247 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0968 41 409 Primary Pumps ATPases AT5G44240 75.505 0.0 612