Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0961 ATGTCTTCGTTGTTCAAGGATCTATCCAAGCTTTCAGCCTATCGAGATAGAAAATTTCCGGGAACACAAGAGGAATTTGAGCAAGCGCTCTTGACTTCAGCAACTGTTTATGTGGGAAATATGTCGTTTTACACAACAGAAGAGCAAGTTTATGAACTTTTTTCTCGAGCTGGAGAAATTAAGAAAATTATCATGGGACTGGATAAAAACTCGAAAACTCCCTGTGGTTTTTGTTTTGTTTTATTCTACTCTCGAGAAGATACCAAAGATGCTGTCAAGTACATAAGTGGGACAATACTTGATGATCGTCCTATTCGTGTAGATTTTGACTGGGGATTCCAGGACGGAAGACAATGGGGTCGGGGTCGCAGTGGTGGTCAGGTGCGTGATGAATATCGGACTGATTATGATCCTGATATCCTTTTACATGTTAAATTTTAA 441 0.3991 MSSLFKDLSKLSAYRDRKFPGTQEEFEQALLTSATVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLFYSREDTKDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDILLHVKF 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0961 146 Gene3D - 5 140 IPR012677 -
Lele31g0961 146 PANTHER 20 KD NUCLEAR CAP BINDING PROTEIN 2 139 IPR027157 GO:0000339|GO:0005846|GO:0045292
Lele31g0961 146 SMART rrm1_1 35 108 IPR000504 GO:0003723
Lele31g0961 146 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 34 112 IPR000504 GO:0003723
Lele31g0961 146 FunFam Nuclear cap-binding protein subunit 2 4 143 - -
Lele31g0961 146 CDD RRM_NCBP2 36 113 IPR034148 -
Lele31g0961 146 SUPERFAMILY RNA-binding domain, RBD 27 137 IPR035979 GO:0003676
Lele31g0961 146 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 36 106 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0961 Lele-ChrLele31 16847661 16849113 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0961 23 107 Eukaryotic Initiation Factors Gene Family AT2G36660 30.588 2.25e-07 47.0