Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0959 ATGCCGATTCTGGGTGTCCGGACCGACGATGCCGTTTCGTCCGGGTCGCCTGAGCGCAGGATCATAGTCGCGAACAAATTGCATAAACGGGCTTATCGGGATGCAAACACCAAGAAATGGAGTTTCGAATTCGATAGTGATAGTTTGTTCCTGCAGCTGAAAGACGGGTTCCCCTCCGATGTCGACGTTTCTTACGTGACCAAATGGTTCGCGGTTCCTGATCGAGCAAGGAGACAAAGTGCTGGGAAGAAAACGCAGAGAGACGTTAAGGTTATATCACGCTCTGCTGATGAGTTCACTCGAGAACGAAGTAATGATCTTCAGGTTCAATGGATGGAGTCTGGCTCCTATTTTGTGACTGTTTTACAGCTTTATCAATGTAGGCTGAATATGTTGGATTGCCTAAGTGTAAGTAAACTTGTAACATTGATCATTGTGTTTGCAGATATTCGGCTCTGGGATATGTCTTCAAGTGTCAGACTTTGGAATGTTCCTGTTGCTGCACCTATGGAGTCAGGTAGCTCAACTGAGAATTCTGCCAAGGTGGTGCATTCTCATGCCCCATCAGTGTTTATGTTTGGAAGAATGCATTTTGGTAGGGGTGTTGATCACCAGTGGGACGGTGAGCTGTTTGCTACTGTTGGTGCTCAAGTAGATATATGGAACCACAACAGTTTTGAATGGGGATCAGATTCAGTAATATCTGTCCGGTTCAATCCTGGAGAACCAAATCTCTTGGCAACATCAGCTAGTGATCGGAGCATAACACTATATGATTTGCGTATGGCTTCCCGTGTCAGGAAAATCGTAATGATGGCAAATGAAGATGGTAATTGCTATAGCTATGATGCTAGGAAACTTGATGAAGCCAAATGTGTTCACAAAGATCATGTTTCTGCTGTCTTGGATATTGACTACTCACCAACTGGCCGGGAATTTGTCACTGGATCATATGATAGAACAGTAAGAATTTTCCAGTATAATGGTGGCCACAGCAGGGAGATTTATCATACCAAGAGAATGCAAAGGGTATTCTGTGTTAAATTCAGCTGTGATGCAAGTTATGTGATTTCCGGAAGCGATGACACTAATCTCAGGCTTTGGAAGGCTAGGGCATCAGAACAACTTGGAGTTGTTCTCCCAAGGGAACGGAAGAAGCATGATTATAATGAAGCCTTAAAGCATCGCTACAAGCACCTCCCTGAAGTGAAACGTATTGTGAGGCACAGGCACCTGCCAAAACCAATATTCAAAGCCACTAGTCTCATGCGCGTTATGGCCGATGCTAGGAAAAGAAAAGACGAGAGAAGGAAAGCTCACAGTGCTCCAGGTAGCATCAAAACAGAGCCATTGCGGAAAAGAAGGATCATCAAAGAAATTGAATAA 1386 0.4444 MPILGVRTDDAVSSGSPERRIIVANKLHKRAYRDANTKKWSFEFDSDSLFLQLKDGFPSDVDVSYVTKWFAVPDRARRQSAGKKTQRDVKVISRSADEFTRERSNDLQVQWMESGSYFVTVLQLYQCRLNMLDCLSVSKLVTLIIVFADIRLWDMSSSVRLWNVPVAAPMESGSSTENSAKVVHSHAPSVFMFGRMHFGRGVDHQWDGELFATVGAQVDIWNHNSFEWGSDSVISVRFNPGEPNLLATSASDRSITLYDLRMASRVRKIVMMANEDGNCYSYDARKLDEAKCVHKDHVSAVLDIDYSPTGREFVTGSYDRTVRIFQYNGGHSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKARASEQLGVVLPRERKKHDYNEALKHRYKHLPEVKRIVRHRHLPKPIFKATSLMRVMADARKRKDERRKAHSAPGSIKTEPLRKRRIIKEIE 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0959 461 Gene3D - 270 399 IPR015943 GO:0005515
Lele31g0959 461 Pfam WD domain, G-beta repeat 337 369 IPR001680 GO:0005515
Lele31g0959 461 Pfam WD domain, G-beta repeat 291 325 IPR001680 GO:0005515
Lele31g0959 461 ProSiteProfiles Trp-Asp (WD) repeats profile. 226 268 IPR001680 GO:0005515
Lele31g0959 461 Gene3D - 132 269 IPR015943 GO:0005515
Lele31g0959 461 MobiDBLite consensus disorder prediction 430 454 - -
Lele31g0959 461 SMART WD40_4 219 259 IPR001680 GO:0005515
Lele31g0959 461 SMART WD40_4 328 369 IPR001680 GO:0005515
Lele31g0959 461 SMART WD40_4 287 326 IPR001680 GO:0005515
Lele31g0959 461 Pfam Sof1-like domain 370 456 IPR007287 -
Lele31g0959 461 ProSiteProfiles Trp-Asp (WD) repeats profile. 294 335 IPR001680 GO:0005515
Lele31g0959 461 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 294 326 - -
Lele31g0959 461 ProSiteProfiles Trp-Asp (WD) repeats profile. 337 378 IPR001680 GO:0005515
Lele31g0959 461 PANTHER U3 SMALL NUCLEOLAR RNA U3 SNORNA ASSOCIATED PROTEIN 157 460 - -
Lele31g0959 461 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 109 374 IPR011047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0959 Lele-ChrLele31 16837651 16844092 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0959 5 66 Trehalose Biosynthesis Gene Families AT2G18700 51.562 1.07e-13 71.6