Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0956 ATGCTCGCGGTGTCACCTTTGAGGGGAACCAAAGATGAAATTAAAAGCTTCCAAGGAGAGATGGTGGGAGGTTTCTCATCAATCATCGCCGGTGAAGATGACGACGGGTTTGGAGAATTTTGCGATGGGAATTTATTGGAAAGCATCAATTTTGACGATCTTTTTGTCGGCGTCAACGTCGACGACGCTGGAGAGGAGTCGTTCGAGAACATGAACTCCGAAATCCTGTCCGAGTTCTCCATGGAGTCGTCGGAGAACATGAACTCGTCGACCTCGCTTTCAGTGGAAAATAATGATAATAGATCAGCTGATCAACACCAGACCAGTATTATTACAACTGGGAAGGAGGAGGAGGAAGAGGAAGAAGATTGTAACGATAAAGTTTCTTCAGCTTGGGATTCAAATTCTGGGTCAAGTCGAGCAGAAGAAGAGACAGTGAACAAAAGAGATGAAGCTGCAACGACGACGAAGACGAAGAAGTTGAAGCCATGGACGAAGGAAGAAGGTGAGCAAAAGGGAAGAAAATCATCAGGCCAATCCAACAATTCACAGGGGAAGAGAAAGGTGAAGGTGGATTGGACCCCAGAATTACACAGACGATTCGTGCAGGCAGTGGAGCAGCTTGGAGTGGACAAAGCAGTTCCTTCCAAAATCTTAGAGATTATGGGAATTGCTTGTCTAACTCGCCACAACATCGCCAGCCACCTCCAAAAATATCGATCGCATAGGAAGCATTTGCTGGCGCGTGAGGCAGAAGCTGCGAGGTGGAATAATAAGAGGAGAGAGGTAAGGCCATGGGCGGCGCCACCCACCGTGGGTTTCCCTCATATGCCTCCTCTTTCGACGTCGACGCCCACGATGCCCCAATATTTTAGACCCTTACATGTATGGGGCCACCCCACCATGGACCACTACTCCTTCATGCCCCGCTGGCCTAAACAACATCATCATCTTCCACATCCGGCGGCGGCGGCCTGGCCATACCCAACCGCTCCGCCACCTCCAGACCCTTCATTCTGGCACCCTCACCACCAGCAGGCCGATCTGAAAGTACTAACCCCGGGAATAGGAACATATTGTTTCCCACCACCGCCAACAACAGTACCTCTGACTACGTCGGGATTTGGATCTCCACCTGTCCCTGGCATCCCACCACCTCACGGCATGTTCACGGCAGACCCCGACATCGGATCTCCCACCGGACAACCTGCCCTACCTTGGCCCAGCTTTGACTTCCACCCGTCGAAGGAAAGCATCGATGTGGCTCTTGGAGATGTTTTATCAAAACCAGGGCTGCCACTTCCTCTGGGTCTTAAAGCCCCGGCGCTTGATAGTGTGTTGAGTGAATTACAGAGACAAGGAATCCCGAAGATTCCTCCCTCTTGTGCTTGA 1392 0.5108 MLAVSPLRGTKDEIKSFQGEMVGGFSSIIAGEDDDGFGEFCDGNLLESINFDDLFVGVNVDDAGEESFENMNSEILSEFSMESSENMNSSTSLSVENNDNRSADQHQTSIITTGKEEEEEEEDCNDKVSSAWDSNSGSSRAEEETVNKRDEAATTTKTKKLKPWTKEEGEQKGRKSSGQSNNSQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSKILEIMGIACLTRHNIASHLQKYRSHRKHLLAREAEAARWNNKRREVRPWAAPPTVGFPHMPPLSTSTPTMPQYFRPLHVWGHPTMDHYSFMPRWPKQHHHLPHPAAAAWPYPTAPPPPDPSFWHPHHQQADLKVLTPGIGTYCFPPPPTTVPLTTSGFGSPPVPGIPPPHGMFTADPDIGSPTGQPALPWPSFDFHPSKESIDVALGDVLSKPGLPLPLGLKAPALDSVLSELQRQGIPKIPPSCA 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0956 463 MobiDBLite consensus disorder prediction 81 110 - -
Lele31g0956 463 FunFam Two-component response regulator 184 247 - -
Lele31g0956 463 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 185 244 IPR017930 -
Lele31g0956 463 Pfam Myb-like DNA-binding domain 191 240 IPR001005 -
Lele31g0956 463 MobiDBLite consensus disorder prediction 142 174 - -
Lele31g0956 463 Gene3D - 185 246 - -
Lele31g0956 463 MobiDBLite consensus disorder prediction 81 189 - -
Lele31g0956 463 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 462 IPR044825 GO:0003700|GO:0045893
Lele31g0956 463 SUPERFAMILY Homeodomain-like 186 245 IPR009057 -
Lele31g0956 463 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 188 242 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0956 Lele-ChrLele31 16816421 16820533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0956 38 341 G2-like Transcription Factor Family AT5G44190 38.580 1.32e-48 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele31g0956 Myb_DNA-binding 4e-08 CL0123