Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0955 ATGCTGAAACGAACTCACGCTTCTTCGTTGGTGATTCGGTTTGGGCCCAAGAGTTTGAAAACCAACACTCGCACTATATGCTTCGTCTTTGTCTTCTTCTTCTTCAATCATGGGAAGCTGCAAGCATGTGGCTCTGTTGCTGGGAGAATGCTGCATAAGGATCCTTCGACTGAGCACAACAAAATACTGTATGTGGTTCAATTCAATTGCAGGATCATTTGCCTCCACGTTATGATTGAGGAGCTGAAGAAGAGAAAGAGAGCTGAGGAACACGATTCCAACATGGGTGTCGATTATTACAAGATCTTGCAGGTTGACAAAAATGCCAAAGATGACGACTTGAAGAAGGCTTACAGGAAGCTTGCCATGAAATGGCATCCTGATAAGAACCCCAATAATAAGAAAGAAGCTGAAGCAAAATTCAAGCAGATATCTGAAGCCTATGACGTTCTCAGTGATCCTCAAAAGAGAGTTGTCTATGATCAATATGGCGAAGAGGGTCTGAAGGGTGGGGTTCCGCCTCCCGATGCCGGAGGAGCTTCTTTCTTTTCAACGGGAGAAGGACCGACGTCGTTTCGGTTCAATCCTAGAAATGCCGACGACATTTTTGCAGAATTTTTCGGGTTCACGAGCCCATTTGGAAGCGGTGGTGGCCATGGAGGGATGAGTTCGTCGAGGTTCTCTAGTGGGATTTTTGGTGATGATATGTTTGGATCATTTGGAGACGGAAGGGGAGTCCATATGCATCCAGGTGCTCCTCGAAAAGCTCCTCCGATTGAGAACAGATTGCCCTGTAGTCTCGAAGACTTGTATCAAGGAACTACAAAGAAGATGAAGATCTCTAGAGAAATTGCTGATGCTAGTGGCAAAACCCTGCCTGTAGAGGAGATCTTAACTATCAATATCAAACCTGGTTGGAAGAAGGGTACAAAGATAACCTTCCCAGAGAAGGGAAATGAGCAGCCAAATGTGACCCCTGCGGACCTTGTTTTTATCATCGATGAAAAGCCTCACAGTGTTTTCACTCGGGAGGGAAATGATCTCGTTGTGACGCAAAAGATTTCTCTCGTGGAGGCCTTGACTGGTTATACCGTGCAGCTGACTACCTTGGATGGAAGAAACCTGACCATACCAGTCAACAATGTGATTCATCCAACTTATGAGGAAGTTGTTCCAAGAGAAGGCATGCCACTTCAAAAGGATCCCACAAAGAAGGGAAACTTGAGGATAAAGTTCAACATTAAGTTCCCAACTCGGCTGACATCTGAGCAGAAGGCAGGAATCAGGAAACTCTTGGGGGCCTAA 1305 0.4567 MLKRTHASSLVIRFGPKSLKTNTRTICFVFVFFFFNHGKLQACGSVAGRMLHKDPSTEHNKILYVVQFNCRIICLHVMIEELKKRKRAEEHDSNMGVDYYKILQVDKNAKDDDLKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYDVLSDPQKRVVYDQYGEEGLKGGVPPPDAGGASFFSTGEGPTSFRFNPRNADDIFAEFFGFTSPFGSGGGHGGMSSSRFSSGIFGDDMFGSFGDGRGVHMHPGAPRKAPPIENRLPCSLEDLYQGTTKKMKISREIADASGKTLPVEEILTINIKPGWKKGTKITFPEKGNEQPNVTPADLVFIIDEKPHSVFTREGNDLVVTQKISLVEALTGYTVQLTTLDGRNLTIPVNNVIHPTYEEVVPREGMPLQKDPTKKGNLRIKFNIKFPTRLTSEQKAGIRKLLGA 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0955 434 PRINTS DnaJ domain signature 118 133 IPR001623 -
Lele31g0955 434 PRINTS DnaJ domain signature 100 118 IPR001623 -
Lele31g0955 434 PRINTS DnaJ domain signature 156 175 IPR001623 -
Lele31g0955 434 PRINTS DnaJ domain signature 136 156 IPR001623 -
Lele31g0955 434 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 95 432 - -
Lele31g0955 434 Gene3D - 258 336 - -
Lele31g0955 434 Pfam DnaJ domain 98 161 IPR001623 -
Lele31g0955 434 SUPERFAMILY HSP40/DnaJ peptide-binding domain 253 345 IPR008971 GO:0006457|GO:0051082
Lele31g0955 434 CDD DnaJ 98 153 IPR001623 -
Lele31g0955 434 Gene3D DnaJ domain 96 242 IPR036869 -
Lele31g0955 434 FunFam DnaJ subfamily B member 13 97 217 - -
Lele31g0955 434 SMART dnaj_3 97 156 IPR001623 -
Lele31g0955 434 ProSitePatterns Nt-dnaJ domain signature. 141 160 IPR018253 -
Lele31g0955 434 Gene3D - 338 418 - -
Lele31g0955 434 FunFam DnaJ subfamily B member 13 338 418 - -
Lele31g0955 434 CDD DnaJ_C 257 420 - -
Lele31g0955 434 FunFam Dnaj homolog subfamily b member 255 336 - -
Lele31g0955 434 Pfam DnaJ C terminal domain 259 417 IPR002939 -
Lele31g0955 434 SUPERFAMILY Chaperone J-domain 97 193 IPR036869 -
Lele31g0955 434 ProSiteProfiles dnaJ domain profile. 98 164 IPR001623 -
Lele31g0955 434 SUPERFAMILY HSP40/DnaJ peptide-binding domain 340 426 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0955 Lele-ChrLele31 16803226 16807017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0955 99 163 C2H2 Transcription Factor Family AT1G74250 37.681 6.16e-09 56.2