Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0952 ATGTCAAAGCTGACGAATCTGAGACGCTTCGATGCGTCGACGAACATGTTGACTGGGACGATTCCTGATGAGTTGTGCCGGTTGGAGCTCGAATCTCTTAATTTGAACGACAATAAACTTGTTGGACTCTTACCAGAGAGCATAGCTCTTTCGCCGAATCTGCAGGAGCTCAAATTGTTTAACAATACGCTTACGGGGAAGTTACCAAGTGCTCTTGGTAATAACTCGAAGCTCATGAGTCTGGGAGAATGCACGAGCTTAAACAGGGTCCGAATGAGGAATAACAATCTCTCAGGCATAGTTCCTGATTCTCTCTGGGGTCTACCTCACATGTATTTGCTGGAGCTTCTTCATAATTCTCTATCTGGGCAAATTTCCAGCAAAATATCTGGTGCTCGTAATCTGTCACAGTTGTTAATTTCGAACAACCAATTTTCTGATTCGATACCTGATGAGATTGGGTCGTTGAATAATCTTGTTGACTTTGATGGCAGCCATAATACATTCTCTGGTCAGATTCCGGCCAGTATAGTCAAGCTGAGCCAGTTGGGAAGGCTTGATCTCAGTGACAATAAACTTTCCGGAGCAATACCTGGAGAAATTGATGAATTGAATAAGCTCAGTGAGCTTAACTTGGCAAACAATATGCTTGACGGGAATATTCCAAAGGAAATAGGGAGCTTGCCTGTGCTCAATTATCTTGATCTTTCAAGCAATCAGTTATGTTGTGAAATTCCACCCCAGTTGCAAAACTTGAAGCTCAATTCGCTGAATTTGTCATACAATCATCTTTCTGGGAACATTCCTTTTCTTTATGACAACGAGAATTACAGAAAGTGTTTCATAGGGAATCAGGGCCTCTGTGGTAATCTCTATGGACTTTGTCCACACTACGGTGAAAGTAAGAACCCGAGGTATCTGTGGCTTTTCCGGTCAATATTTGTGCTTTCTGGTATTGTATTTGTTGTTGGGGTTGCATGGTTTTACTTCAAATACCGAAGCTTCAAGAAATTGAGAAAAGGATTTAACGTGTCAAAGTGGAGATCATTTCACAGGTATGGATTCAGCGAGCTTGAGATTGTTAAGTTGCTGAGTGAAGATAACGTGATTGGGAGCGGAGCATCTGGAAAGGTCTACAAAGTAGCGCTTAGCAATGGCGAGATAGTGGCAGTGAAGAAACTCTGGAGGGCAACTAAGAAAGAAGATGGAAGTGTTGGTCCTGAGAAAGATGAATTCGAAGTTGAAGTTGAGACCTTGGGAAAGATCAGACACAAGAATATTGTAAGGCTATGGTGTTGCTGCAACACTGGGGATAGCAAGCTTCTAGTCTATGAATACATTGGAGCCGGCCAAGGCGGAGGATCCATGTCTGTCATTGCCGGATCTTATGGTTACATTGCACCAGAGTACGCCTATACCCTTCGGGTGAATGAAAAGAGTGATATTTATAGCTTTGGAGTGGTTATTCTTGAACTGGTGACAGGGAAACCCCCCATTGATTCACAGTATGGAGAAGAAGATTTGGTGAAATGGGTTTCCAAATCATTGAAAGAGAAAGGAATAGATAAAGTGATTGATCCATGTCTTGATTCCAAATACGAAGAACAAATCAGCAAGGTACTCAGTATAGGGCTTCTTTGCACAAGCTGTCTTCCCATAACTCGTCCTTCCATGCGTCGAGTGGTGAAAATGCTTCAGGAAGTTTCTGCAGATCCAAAATCCAGAAGTACTGTGAAGAGGGACGGAAAACTCTCCCCTTATTATCACGAAGAAGCCGGTGATCATGAAAGCAGAGTCTAA 1800 0.4267 MSKLTNLRRFDASTNMLTGTIPDELCRLELESLNLNDNKLVGLLPESIALSPNLQELKLFNNTLTGKLPSALGNNSKLMSLGECTSLNRVRMRNNNLSGIVPDSLWGLPHMYLLELLHNSLSGQISSKISGARNLSQLLISNNQFSDSIPDEIGSLNNLVDFDGSHNTFSGQIPASIVKLSQLGRLDLSDNKLSGAIPGEIDELNKLSELNLANNMLDGNIPKEIGSLPVLNYLDLSSNQLCCEIPPQLQNLKLNSLNLSYNHLSGNIPFLYDNENYRKCFIGNQGLCGNLYGLCPHYGESKNPRYLWLFRSIFVLSGIVFVVGVAWFYFKYRSFKKLRKGFNVSKWRSFHRYGFSELEIVKLLSEDNVIGSGASGKVYKVALSNGEIVAVKKLWRATKKEDGSVGPEKDEFEVEVETLGKIRHKNIVRLWCCCNTGDSKLLVYEYIGAGQGGGSMSVIAGSYGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGKPPIDSQYGEEDLVKWVSKSLKEKGIDKVIDPCLDSKYEEQISKVLSIGLLCTSCLPITRPSMRRVVKMLQEVSADPKSRSTVKRDGKLSPYYHEEAGDHESRV 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0952 599 ProSiteProfiles Protein kinase domain profile. 364 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0952 599 Pfam Protein kinase domain 454 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0952 599 Pfam Protein kinase domain 366 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0952 599 MobiDBLite consensus disorder prediction 573 599 - -
Lele31g0952 599 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 455 567 - -
Lele31g0952 599 Gene3D Transferase(Phosphotransferase) domain 1 448 596 - -
Lele31g0952 599 Gene3D Phosphorylase Kinase; domain 1 346 446 - -
Lele31g0952 599 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 174 295 - -
Lele31g0952 599 ProSitePatterns Protein kinases ATP-binding region signature. 370 393 IPR017441 GO:0005524
Lele31g0952 599 SUPERFAMILY Protein kinase-like (PK-like) 365 571 IPR011009 -
Lele31g0952 599 SUPERFAMILY RNI-like 2 271 - -
Lele31g0952 599 PRINTS Leucine-rich repeat signature 228 241 - -
Lele31g0952 599 PRINTS Leucine-rich repeat signature 183 196 - -
Lele31g0952 599 MobiDBLite consensus disorder prediction 571 599 - -
Lele31g0952 599 Gene3D Ribonuclease Inhibitor 1 297 IPR032675 -
Lele31g0952 599 FunFam Receptor-like protein kinase HSL1 348 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0952 Lele-ChrLele31 16782004 16784275 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0952 1 597 Receptor kinase-like Gene Family AT1G28440 45.920 0.0 548
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele31g0952 Pkinase 1.9e-08 CL0016