Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0932 ATGAGCAGTCCACAGGAAGGCGGCTTTCCTTTCGACTTTCCGGCAAATTTCCCAAGAACATCCTACTCCGATGACAGCAATAACTGGAACACCAAAATCTTGTACGTAGCCATTATCTCCTTGTCAATCGTCTTAGTCCTAGTCTTTGCCCTTCATTTCTACGCCAGATACTCCTTCGGCGATCCACCAAACAACACCGGCCTCAACCCCACCGTCATTGCCTCTCTTCCCGCCTTCGTCTATAAACGAATAAACGACAACAAGTCTCGGAACGAAAATGACGAAGACCGCCGTGGCGATTCTTCCTCCGTCATGGAATGCTCTGTTTGTCTGAGCAATCTGGAGGATGGAGAAGAAGCAAGGCTGCTTCCCAATTGCAAGCACGTGTTCCACGTGGCTTGTATTGACCGGTGGCTGGCGTCTCATTCGACGTGCCCAATTTGTCGAACCACGGCTCGGCCGGTGATCGACCCGCGGCCACGTGAGGGTCCGGTCGGGGTCGGGCCGACACTGCCGGCTGCGAAACCTACTGCAGAAGGCACATCTGATGGCGGCGGAGCTAAAAGTAGTGGTTCAGTTTCAAGGTTGAGCTCCTTCAGAAGAATGCTAAGTAGAGAAAGATCGACCCCAAGAATCCAACCTTCTTCTTTTTCCTCTATCTGTGATGATAGTATTGATCGTGATTTAGAGAGACCGTGA 699 0.5136 MSSPQEGGFPFDFPANFPRTSYSDDSNNWNTKILYVAIISLSIVLVLVFALHFYARYSFGDPPNNTGLNPTVIASLPAFVYKRINDNKSRNENDEDRRGDSSSVMECSVCLSNLEDGEEARLLPNCKHVFHVACIDRWLASHSTCPICRTTARPVIDPRPREGPVGVGPTLPAAKPTAEGTSDGGGAKSSGSVSRLSSFRRMLSRERSTPRIQPSSFSSICDDSIDRDLERP 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0932 232 CDD RING-H2_RNF111_like 106 149 - -
Lele31g0932 232 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 61 154 IPR013083 -
Lele31g0932 232 Pfam Ring finger domain 106 149 IPR001841 -
Lele31g0932 232 ProSiteProfiles Zinc finger RING-type profile. 107 149 IPR001841 -
Lele31g0932 232 MobiDBLite consensus disorder prediction 154 232 - -
Lele31g0932 232 PANTHER RING FINGER DOMAIN-CONTAINING 25 151 - -
Lele31g0932 232 MobiDBLite consensus disorder prediction 183 199 - -
Lele31g0932 232 SUPERFAMILY RING/U-box 106 159 - -
Lele31g0932 232 SMART ring_2 107 148 IPR001841 -
Lele31g0932 232 MobiDBLite consensus disorder prediction 208 222 - -
Lele31g0932 232 FunFam E3 ubiquitin-protein ligase ATL6 60 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0932 Lele-ChrLele31 16685204 16685957 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0932 28 231 C3H Transcription Factor Family AT2G42360 42.609 2.77e-46 152