Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0920 ATGCAGGGACGAGGGTTCGATTCTCTCACTACTCGATTCCGCGATTTGTTGGGTTCTGACAGAAACAAGCCTGATTTTAAAGAACTCGATCTGGGTTCTCCTGTTTCTCCATTGAAAACCCCTGCCACTGTTAACGCTGCCGGCTCCGGCGCTTCTTACAACACCTCAAGCTGCGGCTCCAGCTCCTCTGCCGGATCGGTTTCCGGAAGCAGAAATACCGTGGCCAAGTTGCCCAGTAAACCGGACGGGAAGCTCAGCAACAACTCCGGTGAGCTCCGGGAGACCAACTCAAACGCCTCCGAGAGCCTTCCATCGCCTTCGGCATCCCGACGCACTAAGCCGGGTCATAGGAGATCGGTTTCAGCTGGAGCGCCGTTAATATACTCCGGTGGAAGTTCTAGCAGCTCGGGGAATAACAGTCATTCAAATGGTGCAACTTCAGGGAGTAATTTGCTCCCAACCGGCAATATTTGTCCGACAGGGAAGATCTCAAAAACCGGTTTGGCGCCTAGAACGCCCAATAGAACTGATGTTTTGGGCTCAGGGACGGTAAACTACGGCCGAGGCAACATAATGCGCGGTGGCGGGAAATTGGGCAATGGAGCGCACGTCATCGTCGACGACAATGTCGCCGGGAATTCTCAGCTCGGAGGGGTTTCGAGCATTGTGAAGCGGGCAATGAGTAGTTCTGATCCTGAGGAGGTTAAGAAAGCTGGAAATGAGCTATATAGAAGCGGTCACTTTGCGGAGGCATTGTCGTTGTACGATAGCGCAATCTCCATATCACCCAATAATCCTGCTTACCGGAGTAATCGAGCGGCAGCATTGACGGCACTGGGGAAGTTGGCCGTGGCGGCGAAGGAGTGCGAAGAAGCTGTGAAATTGGACCCTGGTTATGCCAGGACTCATCAGAGACTGGCTTCACTCTATCTGCGCTTTGGGCAGGTTGAGAATGCGCAGAGCCATATGTGTCTTCCTGGAAAACAGGTCGATCAATCTGAACTGCACAAATTGGGGCTATTAGAGAAGCATTTGAAACGATGTGCAGAAGCACGAAAGATTGGTGATTGGAAAAGCGCAGTTAGGGAATCAGACGCAGCCATTGCTGTTGGAGCAGATTACTCTCCCCAGCTTGTGGCTTGTAAAGCTGAAGCCTATTTGAAACTTCATCTTCTTGACGACGCTGAGTCTACCCTCTCCAACATTCCAAAGCTTGAGGGTTGCTCTCAGACCAAGTTCTTTGGTATGGTTGGTGAAGCATATGTTCCCTTTGTTCGAGCTCAGGTTGAGATGGCCTTAGGAAGGTTTGAGAATGCAGTAGCAGAAGCAGAGAAGGCTAGTTTGATAGCTTATAGCAACATGGAAGTTGCAAAGGTAGTAAATACTGTGAAAATAGTGGCAAGGGCTCGCTCTCGAGGCAACGATCTTTTTGGCCGGGGAAGATTTTCTGATGCTTGCTCTGCTTATGGAGAAGGCCTCAAATATGATAGTTCCAACTATGTGTTGTTCTGCAATAGAGCTGTTTGCTGGTCTAAACTTGGACTGTGGGAAAAGTCTGTTGAGGACTGCAACCATGCTCTGCAAATCCAACCAAACTGTCCCAAGGCCCTTCTCCGTAGGGCTGCCTCAAATTCTAAGCTTGAAAGGTGGGGAGATGCTATAAGAGATTATGAAGCATTAAAGCGTGAACTTCCTAGAGACAGTGAAGTTGCCGAGTCTCTTCATCGGGCTCAGCTTGCATTGAGTAAATCTCGCGGGGAAGATTGGGGTTCAAAACTTGTTCTTGAGGTTGAAGAGGTCTCTACATTAGGTAGATTCAAAGCTGCAATTGCTTCTTCTGGTATCTCAGTGGTTCATTTCAAGAAGGCATTTAATGAGCAATGTGAAAAAATATCCCCTTTCATAAATACGCTCTGCATTCAATACCCATATGTTAAATTCATCAAGGTGGATGTGGAAGACTGTGCAAGTGTAGCAAAAGCTGAGAGCATAACAACAGTGCCAAGCTTCAGAATATATGCAAATGGAGAGAAGGTGATGGAGATGATAAGGCCAAGCCACCAGTTGTTGGAGGATTCTGTGAGGAACTGTTGCAATCTCTAG 2103 0.4855 MQGRGFDSLTTRFRDLLGSDRNKPDFKELDLGSPVSPLKTPATVNAAGSGASYNTSSCGSSSSAGSVSGSRNTVAKLPSKPDGKLSNNSGELRETNSNASESLPSPSASRRTKPGHRRSVSAGAPLIYSGGSSSSSGNNSHSNGATSGSNLLPTGNICPTGKISKTGLAPRTPNRTDVLGSGTVNYGRGNIMRGGGKLGNGAHVIVDDNVAGNSQLGGVSSIVKRAMSSSDPEEVKKAGNELYRSGHFAEALSLYDSAISISPNNPAYRSNRAAALTALGKLAVAAKECEEAVKLDPGYARTHQRLASLYLRFGQVENAQSHMCLPGKQVDQSELHKLGLLEKHLKRCAEARKIGDWKSAVRESDAAIAVGADYSPQLVACKAEAYLKLHLLDDAESTLSNIPKLEGCSQTKFFGMVGEAYVPFVRAQVEMALGRFENAVAEAEKASLIAYSNMEVAKVVNTVKIVARARSRGNDLFGRGRFSDACSAYGEGLKYDSSNYVLFCNRAVCWSKLGLWEKSVEDCNHALQIQPNCPKALLRRAASNSKLERWGDAIRDYEALKRELPRDSEVAESLHRAQLALSKSRGEDWGSKLVLEVEEVSTLGRFKAAIASSGISVVHFKKAFNEQCEKISPFINTLCIQYPYVKFIKVDVEDCASVAKAESITTVPSFRIYANGEKVMEMIRPSHQLLEDSVRNCCNL 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0920 700 MobiDBLite consensus disorder prediction 38 75 - -
Lele31g0920 700 Gene3D Glutaredoxin 587 697 - -
Lele31g0920 700 CDD TRX_family 606 691 - -
Lele31g0920 700 SUPERFAMILY TPR-like 471 582 IPR011990 GO:0005515
Lele31g0920 700 ProSiteProfiles TPR repeat profile. 232 265 IPR019734 GO:0005515
Lele31g0920 700 SUPERFAMILY Thioredoxin-like 589 686 IPR036249 -
Lele31g0920 700 MobiDBLite consensus disorder prediction 82 109 - -
Lele31g0920 700 MobiDBLite consensus disorder prediction 16 181 - -
Lele31g0920 700 MobiDBLite consensus disorder prediction 126 181 - -
Lele31g0920 700 Coils Coil 426 446 - -
Lele31g0920 700 Gene3D Tetratricopeptide repeat domain 230 586 IPR011990 GO:0005515
Lele31g0920 700 SUPERFAMILY TPR-like 233 321 IPR011990 GO:0005515
Lele31g0920 700 FunFam TPR repeat-containing thioredoxin TTL4 593 698 - -
Lele31g0920 700 SMART tpr_5 534 567 IPR019734 GO:0005515
Lele31g0920 700 SMART tpr_5 466 499 IPR019734 GO:0005515
Lele31g0920 700 SMART tpr_5 500 533 IPR019734 GO:0005515
Lele31g0920 700 SMART tpr_5 232 265 IPR019734 GO:0005515
Lele31g0920 700 SMART tpr_5 266 299 IPR019734 GO:0005515
Lele31g0920 700 SMART tpr_5 420 453 IPR019734 GO:0005515
Lele31g0920 700 SUPERFAMILY TPR-like 343 454 IPR011990 GO:0005515
Lele31g0920 700 Pfam Thioredoxin 604 684 IPR013766 -
Lele31g0920 700 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 19 695 IPR044534 -
Lele31g0920 700 Pfam TPR repeat 239 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0920 Lele-ChrLele31 16597617 16600456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0920 465 536 U-box Gene Family AT3G07370 34.722 6.04e-06 46.6