Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0914 ATGGCGACTCGGAACATCGAGAAGATGTGTTCCATTGATGCTCAACTGAGGTTGCTGGCGCCTGGAAAGGTGTCTGATGATGATAAGTTAGTCGAGTATGATGCTTTGTTGATGGACCGATTCCTCGACATTCTTCAGGATTTGCATGGCGAAGACATCAGAGAAACGGTTCAAGATTGCTATGAGCTGTCAGCTGTGTATGAAGGGAAGCATGGCCCTGAGAAGTTGGAGGAGCTCGGGAATAAGTTGACTGGGCTTGATGCTGGGGACTCTATCGTGGTGGCCAAATCATTTTCTCATATGCTGAATTTGGCCAACTTGGCCGAGGAAGTTCAGATAGCCTACCGAAGAAGAATCAAGTTATTAAAGAAGGGTGATTTTGCTGATGAGAACTCGGCCATAACTGAATCTGACATTGAAGAGACCTTCAAGAGGCTTGTGAATCAATTGAAGAAGACCCCGCAGGAAGTGTTTGATGCTTTGAAGAACCAAACTGTAGATTTGGTCCTGACTGCTCATCCTACTCAGTCTGTCCGAAGATCTTTGCTACAAAAGCATTCTAGGATAAGGAATTGCTTAACTCAATTGTATGCTAAAGACATAACACCTGACGATAAGCAGGAACTTGATGAGGCCTTACAAAGGGAGATTCAAGCTGCATTTCGTACAGATGAAATTAGAAGGAGTCCTCCTACCCCTCAAGACGAGATGAGGGCAGGAATGAGCTACTTTCATGAAACAATCTGGAAGGGTGTACCTAAGTTTTTGCGCCGGGTTGACACAGCTCTGAAGAACATTGGAATAAATGAACGTGTGCCATATAATGCCCCTGTTATTCAATTCTCTTCTTGGATGGGAGGGGATCGTGATGGAAACCCCAGAGTAACCCCAGAAGTTACAAGAGATGTTTGCTTATTGGCTAGAATGATGGCTGCTAATTTGTACTTCTCTCAGATAGAAGATCTTATGTTTGAGTTGTCAATGTGGCGCTGCAATGACGAGCTCCGTGTTCGTGCTGATCAACTCCATAGTTCATCAAAAAGAGATGCAAAACATTATATTGAGTTTTGGAAGCAGATTCCTCCTAATGAGCCATATCGTGTTGTTCTTGGTGATGTGAGAGACAAACTGTATAATACACGTGAACATGCTCGTCACATATTAGCTAATGGGACCTCTGACATCCCTGAGGAGACAACCTTCACAAATGTTGAGCAGTTCCTGGAGCCTCTTGAGCTCTGCTATAGGTCACTCTGGGCCTGTGGGGACCGATCAATAGCTGATGGAAGCCTCCTTGATTTCTTACGGCAAGTTTCAACTTTTGGACTGTCACTTGTAAGGCTTGACATTCGTCAAGAATCAGACAGGCACACTGATGTTATGGATACAATTACAAGGCACTTGGGTATTGGTTCTTACCGAGAATGGTCTGAGGAACGCCGGCAGCAATGGCTCTTGTCTGAGCTCAGTGGGAAGCGTCCTCTTTTTGGCAATGATCTTCCTAAAACTGAAGAAATTTCTGTTGTGTTAGAAACCTTCCATGTCATCGCAGAACTTCCACCAGACAATTTTGGTGCCTACATCATCTCAATGGCAACTTCTCCATCTGATGTGCTTGCTGTAGAGCTTTTACAGCGTGAATGTCATGTGAAAAAGCCATTAAGGGTTGTCCCCTTGTTTGAAAAGCTTGCTGATCTTGAGGCTTCTCCTGCTGCATTAGCTCGTCTGTTCTCTATAGATTGGTACAGAAACCGCATAAATGGGAAGCAAGAAGTTATGATAGGATACTCAGACTCGGGAAAGGATGCTGGCCGCCTCTCTGCAGCTTGGGCACTATACAGAGCTCAAGAAGAGCTCATAAAGGTTGCAAAGGAGTTTGGCATTAAGCTTACAATGTTCCATGGAAGAGGAGGAACTGTTGGAAGAGGAGGAGGTCCCACTCATCTTGCTATACTGTCTCAGCCCCCAGGGACCATTCAAGGATCACTTCGTGTAACGGTTCAAGGTGAAGTCATTGAGCAGTCATTTGGGGAAGAACACTTGTGCTTTAGAACACTTCAGCGCTTCACAGCTGCTACATTAGAGCATGGAATGCATCCTCCTGTGTCTCCAAAGCCAGAATGGCGAGCTCTCATGGATGAGATGGCAGTCATTGCAACAAAGGAGTATCGCTCTGTTGTTTTCCAGGAACCCTGTTTTGTTGAATACTTCCGATGTGCAACACCAGAGTTGGAGTATGGACGTATGAACATTGGGAGCCGTCCCTCAAAAAGGAAGCCAAGTGGGGGCATCGAATCACTTCGGGCTATTCCATGGATCTTTGCTTGGACCCAAACAAGGTTTCACCTTCCAGTATGGCTTGGCTTTGGGTCAGCATTTAAGCATGTGATTGAGAAGGATCCCAAGAATCTCCAAATGCTTCGAGATATGTATAATCGATGGCCTTTCTTCAGAGTAACCCTTGATCTGATTGAGATGGTGTTCGCCAAGGGTGACCCAGGAATTGCTGCTTTATATGACAAACTCCTAGTGTCAGGAGAACTACGGGCTCTTGGAGAGCGCTTAAGGTCTAAATATGAAGAAACCAAAAGCCTTCTTCTCCAGATTGCTGGGCACGGAGATGTTCTTGAGGGAGACCCTTACTTAAAGCAAAGACTCCAACTTCGAGATTCACACACGACAACTCTGAATGTGTTGCAAGCTTACACTTTGAAGCGAATCCGTGATCCAGACTACCATGTGAAGCTGAGGCCTCATTTGTCAAAGGAGTATATGGAATCAAGCAAACCAGCAGCAGAGCTTGTGAAACTGAACCCAACAAGCGACTATGCTCCTGGTCTGGAGGACACACTTATTTTGACAATGAAGGGTATTGCTGCTGGCATGCAAAACACTGGTTAA 2901 0.4536 MATRNIEKMCSIDAQLRLLAPGKVSDDDKLVEYDALLMDRFLDILQDLHGEDIRETVQDCYELSAVYEGKHGPEKLEELGNKLTGLDAGDSIVVAKSFSHMLNLANLAEEVQIAYRRRIKLLKKGDFADENSAITESDIEETFKRLVNQLKKTPQEVFDALKNQTVDLVLTAHPTQSVRRSLLQKHSRIRNCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRSPPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPVIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYFSQIEDLMFELSMWRCNDELRVRADQLHSSSKRDAKHYIEFWKQIPPNEPYRVVLGDVRDKLYNTREHARHILANGTSDIPEETTFTNVEQFLEPLELCYRSLWACGDRSIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVMDTITRHLGIGSYREWSEERRQQWLLSELSGKRPLFGNDLPKTEEISVVLETFHVIAELPPDNFGAYIISMATSPSDVLAVELLQRECHVKKPLRVVPLFEKLADLEASPAALARLFSIDWYRNRINGKQEVMIGYSDSGKDAGRLSAAWALYRAQEELIKVAKEFGIKLTMFHGRGGTVGRGGGPTHLAILSQPPGTIQGSLRVTVQGEVIEQSFGEEHLCFRTLQRFTAATLEHGMHPPVSPKPEWRALMDEMAVIATKEYRSVVFQEPCFVEYFRCATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGSAFKHVIEKDPKNLQMLRDMYNRWPFFRVTLDLIEMVFAKGDPGIAALYDKLLVSGELRALGERLRSKYEETKSLLLQIAGHGDVLEGDPYLKQRLQLRDSHTTTLNVLQAYTLKRIRDPDYHVKLRPHLSKEYMESSKPAAELVKLNPTSDYAPGLEDTLILTMKGIAAGMQNTG 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0914 966 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 6 966 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lele31g0914 966 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 169 180 IPR018129 -
Lele31g0914 966 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 592 604 IPR033129 -
Lele31g0914 966 PRINTS Phosphoenolpyruvate carboxylase signature 168 181 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lele31g0914 966 PRINTS Phosphoenolpyruvate carboxylase signature 221 237 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lele31g0914 966 PRINTS Phosphoenolpyruvate carboxylase signature 281 296 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lele31g0914 966 PRINTS Phosphoenolpyruvate carboxylase signature 632 661 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lele31g0914 966 PRINTS Phosphoenolpyruvate carboxylase signature 441 461 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lele31g0914 966 PRINTS Phosphoenolpyruvate carboxylase signature 590 610 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lele31g0914 966 PRINTS Phosphoenolpyruvate carboxylase signature 764 790 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lele31g0914 966 Gene3D Phosphoenolpyruvate/pyruvate domain 309 444 - -
Lele31g0914 966 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 33 966 IPR015813 GO:0003824
Lele31g0914 966 FunFam Phosphoenolpyruvate carboxylase 1 309 444 - -
Lele31g0914 966 Hamap Phosphoenolpyruvate carboxylase [ppc]. 23 966 IPR022805 GO:0006099|GO:0008964|GO:0015977
Lele31g0914 966 Pfam Phosphoenolpyruvate carboxylase 37 966 IPR021135 GO:0006099|GO:0008964|GO:0015977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0914 Lele-ChrLele31 16561967 16567687 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g0793 11 8026206 8030030 Lele31g0914 31 16561967 16567687 CCT
Lele12g0549 12 13824618 13826948 Lele31g0914 31 16561967 16567687 CCT
Lele29g0628 29 3823378 3837244 Lele31g0914 31 16561967 16567687 hybridization
Lele30g0770 30 12084090 12089488 Lele31g0914 31 16561967 16567687 hybridization