Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0911 ATGTTGACTGATGTGTCCGTACAGGTTTCTGATTTTTATAAGCGATCAAATATGGAAAGTCCAGCAAAAGCTGCACTAGAGGAAACAACCCACATATTTGAGAATCAAGGTGCCCAGATACTGGGACAAGTAAAGAATGGTTCATGCCGTCCTCGAGCAATCTTATTTAAAGTGTTAGCAGATACTGTAGGTCTTGAAAGTAGGCTTGTAGTGGGTTTGCCAAATGATGGGGTTGTTGAATGTGTGGACTCATACAAGCATATGTCAGTGATTGTTGTATTAAGTTCTGTGGAACTGCTGGTTGATCTCATGCGATGCCCTGGTCAATTATTATCTCGATCAAACAAGGCAATTTTCCTGACACATATTTCTGCAGCAGGAGAGAGTGATTCTGCAGAAAATGATTCCTGTGATTCACCACTAGAACCAAACAGCCCTTTATATGGGGTTTCAGAGAAAGTGGATCCTGATAGTGCTGAAAAAGAGGAGAACCTCCCTTTCCAGAGGAGATTTGACATTCCTTCAAATGTATCAGACCTTTCCTTGCGAAATTTGATGTTACGGTCAAATACCAGTCTGGATAGGAAATTGAGTTTTTCTCATAGTGAACCCAATATTGCAATTGCATTTGGTCGGTGTAGTCGGAGAAAGGTCATTGCTGAACAGAGGACAGCTAGTTCCAGTCCAGAGCATCCATCATTTAAAGCACATGGACGGTCCTTGCTTAGTGGTGATAGGAAAGCATTCAGAGACTTTGCTGATGATGAGGCTGCATCAAGTGGTGCCATTAATCATGTTGGTGTCAGTTATGGTTTTGATGAAAGCAATGAGTTTGGCTGGGTTGGCTTTCCTCCAGAGAGCCGCCACCAGAATGACAAGTCAGACGGTGCATCTTCATCAGAAGCTCGTAGGATTAGAAGAAGAAGCATCAGCATTACACCTGAGATTGGTGATGATATCGTAAGGGCCGTACGTGCGATGAATGAAACACTGAAGCAGAATCGTCTTTTGAGAGAGCAAGGGGATAATAGCTCAACAAATAGCGTGGGGGACCTTCAGAAAAATATGTCAAATTTCCACCGAGATGGTCATGAGGGATCTAATTTGAATTCTCGTCCACCTGATCAAGTAAATTCCCAAAAAGCAATGTCATTACCCTCTTCACCGCATGGTTACAGAGGGTTTTTCGGAGAAGTCTTCCGTGGTGTCTGGAATGGCACTGACGTTGCAATCAAGGTTTTTCTGGAGCAAGATTTAACTGCTGAAAACATGGAAGATTTCTGCAATGAGATATCAATTCTCAGCCGGCTTCGACATCCAAATGTAATTTTATTTCTTGGGGCGTGCACAAAGCCTCCGCGCTTGTCGATGGTTACTGAGTACATGGAAATGGGATCACTGTATTACTTGATCCATTTGAGCGGCCTAAAGAAGAAGCTTAGCTGGCGGAGAAGACTGAAGATGTTGCGAGATATATGCAGGATCATGACAGAGTCTAGTATCAAAGACGCTTCATCGGCCGGAACTCCAGAATGGATGGCCCCTGAACTTATTCGGAACGAACCATTCAATGAAAAGTGCGATGTATTTAGCCTTGGGGTGTTGATGTGGGAGCTTTGTACTTTGAGCAGGCCTTGGGAGGGTATCCCACCAGAAAGGGTGGTTTATGCTGTTGCTAACGAGGGATCTAGACTGGAGATTCCTGAAGGCCCGTTGGGCAAGCTCATTGCAGATTGTTGGGCAGAACCAAATGAACGGCCAAGTTGTGAGGAGATCCTGTCTCGCTTGCTTGATTGCGAGTGCTCTATGTGCTGA 1815 0.4441 MLTDVSVQVSDFYKRSNMESPAKAALEETTHIFENQGAQILGQVKNGSCRPRAILFKVLADTVGLESRLVVGLPNDGVVECVDSYKHMSVIVVLSSVELLVDLMRCPGQLLSRSNKAIFLTHISAAGESDSAENDSCDSPLEPNSPLYGVSEKVDPDSAEKEENLPFQRRFDIPSNVSDLSLRNLMLRSNTSLDRKLSFSHSEPNIAIAFGRCSRRKVIAEQRTASSSPEHPSFKAHGRSLLSGDRKAFRDFADDEAASSGAINHVGVSYGFDESNEFGWVGFPPESRHQNDKSDGASSSEARRIRRRSISITPEIGDDIVRAVRAMNETLKQNRLLREQGDNSSTNSVGDLQKNMSNFHRDGHEGSNLNSRPPDQVNSQKAMSLPSSPHGYRGFFGEVFRGVWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMEMGSLYYLIHLSGLKKKLSWRRRLKMLRDICRIMTESSIKDASSAGTPEWMAPELIRNEPFNEKCDVFSLGVLMWELCTLSRPWEGIPPERVVYAVANEGSRLEIPEGPLGKLIADCWAEPNERPSCEEILSRLLDCECSMC 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0911 604 ProSiteProfiles Protein kinase domain profile. 385 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0911 604 MobiDBLite consensus disorder prediction 129 163 - -
Lele31g0911 604 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 505 596 - -
Lele31g0911 604 FunFam Serine/threonine-protein kinase isoform 1 389 463 - -
Lele31g0911 604 CDD STKc_MAP3K-like 393 596 - -
Lele31g0911 604 MobiDBLite consensus disorder prediction 334 355 - -
Lele31g0911 604 Gene3D Transferase(Phosphotransferase) domain 1 382 494 - -
Lele31g0911 604 Gene3D Transferase(Phosphotransferase) domain 1 495 603 - -
Lele31g0911 604 MobiDBLite consensus disorder prediction 281 306 - -
Lele31g0911 604 Pfam Protein tyrosine and serine/threonine kinase 501 596 IPR001245 GO:0004672|GO:0006468
Lele31g0911 604 Pfam Protein tyrosine and serine/threonine kinase 393 496 IPR001245 GO:0004672|GO:0006468
Lele31g0911 604 Pfam Ethylene-responsive protein kinase Le-CTR1 5 110 - -
Lele31g0911 604 MobiDBLite consensus disorder prediction 334 386 - -
Lele31g0911 604 MobiDBLite consensus disorder prediction 369 386 - -
Lele31g0911 604 SUPERFAMILY Protein kinase-like (PK-like) 393 596 IPR011009 -
Lele31g0911 604 MobiDBLite consensus disorder prediction 288 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0911 Lele-ChrLele31 16509495 16516605 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0911 1 604 MAP Kinase Kinase Kinase AT3G58640 59.233 0.0 787
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Lele31g0911 PK_Tyr_Ser-Thr 1.3e-18 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0786 09 6205539 6208630 Lele31g0911 31 16509495 16516605 CCT
Lele10g0714 10 5439644 5443197 Lele31g0911 31 16509495 16516605 CCT
Lele29g0631 29 3878619 3888753 Lele31g0911 31 16509495 16516605 hybridization
Lele30g0767 30 12036181 12045341 Lele31g0911 31 16509495 16516605 hybridization