Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0903 ATGGCGGCCCTGAAGCTGCTTCTCTCTCAAGCTCGCCGCCATTGCCTCACCAATCATCATTCTCATTTCCACTCTTCCTGTTTTCTTGGGTCTCGGAGATCCCTTTGTTCTTCTTCTTCTTCACAACCCGATGAATCAGACTCAAAACCTCCACCCCCTCCAAGTAGACCCTCCCCAACCATTTCAATCCAGCCCGTTTCATACCCGGTTAAACCTAAAGACCCGTCACCTCCAGATGCTACTGAATCCTCCGAAGCTCAATTACAAAATCAATCGCTGGCGCCACCCCCTCCTCGCCGTCCACGTGGACCGACATTGGCGGAAGATACCGCGGAATCACGGCGGGCTTGGACCAGGCAAGATATTCGGTATGTAAAGGACGCGCCTTCGATATCGCCGGTGTCCTATTCTTTGCGAGTGGCGCCACTTCCTGAAGATAAGACTACTGCTGGTGCTGAAGCAGTAAAGGATGATGGCGCGAATGCGAACGAAGAAATTCAGAAGGAGACTAGAAAAATTAGGGCGGATGATCAGTTAAAGAGGAGAGTTATTAGAGCTGCAGAAGAGGAGAAGGTGCGAGTTCCTTTTCCAACTCTGATAAAGGTGAAGCAAAAGGAGAAGCCGCCTATCCTTGATTTGACGGAGGCAATTCGCCAACTTAAGGCCAATGCAAAGGCAAAATTTGATGAAACTGTTGAAGTGCATGTAAGATTGGGTATTGAATCAAAGCGAACAGAACTGGCAGTTCGTGGTACTATGACTCTGCCGCATGGTGTGCCTAAGGCTGTCAGTGTGGCTGTGTTTGCAGAAGGAGCTGACGCAGAGGAAGCTAGAGCTGCAGGAGCTGATATGGTTGGTGGTAAAGAGCTTATTGAGGAGATTGCTAATGGTAATAACAAGCTTAGAGTTGACAAGTGCTTCTCAACTCCAGGAATGGCACCTCATCTTGGAAAGATAGCACAATATCTTAGAAAACGTAGACTGATGCCAGACAAGAAACTAGGTACTCTGACCAGTGATATTCCTGGGCAGTTGAAAGAGCTAAGACGGGGTCGTGTCGAGTTTAAAATGGAAAGTAAATCAATTGTGCATGCAGGAGTCGGAAAGGTAAGCTTCAGAGAGGATCAATTACGTGAAAACATAGGTGCATTCATGAATGCTCTATTGGTTGCCAAGCCTGCTGGCTTAAAGAAGACTTCAAAATATGCCGGGTATGTCCTATCTGTCGATATGTGCAGCACGATGGGCCCAGGATTCCCTGTTTCAATACAATCTTTATCAAGAGCAGCTGATAATTACAAGTCTCTAAATGTGGGTTCTCTTCCTCACTCTCCTTTTCCCTCCATCTGGGAATTTTCTGCGGAGCATTGTAAAATGGAGACAGATGATGGATATAAGAGGACGGCGGAGATCTCTTTGGTAGTCATTGTGGTGCTTGCTTCCCTAGCCGTGATTGCTTTGCTTGTTGTACTCAGCTACTATTGCTACATCCGCAACAAAGTCGCTCAGCGCCGCAAGAACAAGAAAAATGTTGACCATACAGAGAAAAGTGAATTTGCAAATCTGCAAGTTGTTGCTGAAAAAGGACTTCAGGTGTTCACTTTTAAGCAGTTGCATTCTGCAACTGGTGGCTTCAGCAAGTCGAATGTGATTGGTCATGGTGGATTTGGATTTGTTTACCGGGGAGTACTCAATGATGGCCGGAAAGTTGCAATTAAGTTCATGGATCAGGCAGGAAAGCAGGGAGAAGAAGAATTTAAAGTGGAGGTTGAATTGCTAAGTCAGTTGCGTTCTCCATATTTGCTGGCATTGCTCGGATACTGCTCCGATAATAATCATAAACTGCTGGTGTATGATTTCATGGCAAATGGTGGTCTGCAGGAACATCTTTATCCTGTCAGCAACTCTAATATCATGCCCATGAAGTTGGATTGGGAAACCCGTTTACGAATAGCACTTGAAGCTGCTAAGGGTTTGGAATATCTTCACGAAGATGTCAGCCCCCCGGTGATTCACAGAGATTTTAAGAGCAGCAACATTCTTCTGGACAAAAAGTTTCACGCAAAAGTTTCCGATTTTGGATTGGCAAAGCTTGGATCTGATAAAGCTGGTGGACATGTCTCCACTCGAGTCTTGGGAACGCAGGGATATGTTGCTCCTGAATATGCACTAACAGGGCATCTAACCACAAAATCAGATGTATACAGTTATGGTGTTGTTCTTTTGGAGCTGCTCACTGGCCGAGTACCAGTCGATATGAAGAGGCCACCAGGAGAAGGCGTTGTTGTTTCTTGGGCTTTGCCCCTTCTCACTGATAGAGAAAAGGTGGTAACGATTATGGATCCTGCATTGGAGGGTCAGTATTCCATGAAAGAGGTTGTCCAAGTGGCCGCGATCGCTGCAATGTGCGTGCAACCAGAGGCGGATTACCGGCCGCTCATGGCAGACGTCGTCCAGTCATTAGTTCCACTGGTGAAGACTCACAGATCGACCTCAAAGGTTGGAAGCTGCTCTAGTTACCATGCCAATAAGTTGTCGCCTGCTCAAGATTCAGTAAGAGCAAATGTATGA 2571 0.4652 MAALKLLLSQARRHCLTNHHSHFHSSCFLGSRRSLCSSSSSQPDESDSKPPPPPSRPSPTISIQPVSYPVKPKDPSPPDATESSEAQLQNQSLAPPPPRRPRGPTLAEDTAESRRAWTRQDIRYVKDAPSISPVSYSLRVAPLPEDKTTAGAEAVKDDGANANEEIQKETRKIRADDQLKRRVIRAAEEEKVRVPFPTLIKVKQKEKPPILDLTEAIRQLKANAKAKFDETVEVHVRLGIESKRTELAVRGTMTLPHGVPKAVSVAVFAEGADAEEARAAGADMVGGKELIEEIANGNNKLRVDKCFSTPGMAPHLGKIAQYLRKRRLMPDKKLGTLTSDIPGQLKELRRGRVEFKMESKSIVHAGVGKVSFREDQLRENIGAFMNALLVAKPAGLKKTSKYAGYVLSVDMCSTMGPGFPVSIQSLSRAADNYKSLNVGSLPHSPFPSIWEFSAEHCKMETDDGYKRTAEISLVVIVVLASLAVIALLVVLSYYCYIRNKVAQRRKNKKNVDHTEKSEFANLQVVAEKGLQVFTFKQLHSATGGFSKSNVIGHGGFGFVYRGVLNDGRKVAIKFMDQAGKQGEEEFKVEVELLSQLRSPYLLALLGYCSDNNHKLLVYDFMANGGLQEHLYPVSNSNIMPMKLDWETRLRIALEAAKGLEYLHEDVSPPVIHRDFKSSNILLDKKFHAKVSDFGLAKLGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMKRPPGEGVVVSWALPLLTDREKVVTIMDPALEGQYSMKEVVQVAAIAAMCVQPEADYRPLMADVVQSLVPLVKTHRSTSKVGSCSSYHANKLSPAQDSVRANV 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0903 856 Pfam Protein kinase domain 546 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0903 856 Gene3D - 213 421 - -
Lele31g0903 856 ProSiteProfiles Protein kinase domain profile. 545 825 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0903 856 Gene3D Transferase(Phosphotransferase) domain 1 621 842 - -
Lele31g0903 856 MobiDBLite consensus disorder prediction 46 60 - -
Lele31g0903 856 ProSitePatterns Serine/Threonine protein kinases active-site signature. 670 682 IPR008271 GO:0004672|GO:0006468
Lele31g0903 856 Coils Coil 152 172 - -
Lele31g0903 856 CDD STKc_IRAK 551 824 - -
Lele31g0903 856 Gene3D Phosphorylase Kinase; domain 1 503 620 - -
Lele31g0903 856 PANTHER OS07G0668900 PROTEIN 506 831 - -
Lele31g0903 856 FunFam 50S ribosomal protein L1 258 351 - -
Lele31g0903 856 CDD Ribosomal_L1 213 421 IPR028364 -
Lele31g0903 856 SUPERFAMILY Ribosomal protein L1 204 422 IPR023674 -
Lele31g0903 856 SUPERFAMILY Protein kinase-like (PK-like) 527 821 IPR011009 -
Lele31g0903 856 FunFam Serine/threonine-protein kinase PBS1 512 620 - -
Lele31g0903 856 ProSitePatterns Protein kinases ATP-binding region signature. 551 573 IPR017441 GO:0005524
Lele31g0903 856 MobiDBLite consensus disorder prediction 33 114 - -
Lele31g0903 856 Gene3D - 258 351 IPR016095 -
Lele31g0903 856 Pfam Ribosomal protein L1p/L10e family 220 417 IPR028364 -
Lele31g0903 856 FunFam Receptor-like serine/threonine-protein kinase ALE2 621 838 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0903 Lele-ChrLele31 16440198 16450483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0903 459 847 Receptor kinase-like Gene Family AT3G58690 78.149 0.0 628
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Lele31g0903 Pkinase 2.6e-42 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0637 29 3939883 3943859 Lele31g0903 31 16440198 16450483 hybridization
Lele30g0760 30 11980590 11986029 Lele31g0903 31 16440198 16450483 hybridization