Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0900 ATGTCCTCCATCCCATTGGGGCCGCCCCAGCACCGACCACTGGTGGCGGCGGCTCCCCAACTACCACCTCCGTTGCCGGTACAAGCGGAGAATGACAAGGAAATGTCAGCTACAGTCCTTGAGGGGAATGATGCAGTCACTGGCCACATAATCTCCACCACAATTGGAGGCAAAAATGGTGAACCTAAGCAGACCATCAGTTACATGGCAGAACGTGTTGTTGGCACCGGTTCATTTGGAATTGTTTTCCAGGCAAAGTGTTTGGAGACTGGGGAAGCAGTGGCTATAAAGAAGGTCTTGCAGGACAGGCGGTACAAGAATCGTGAGCTGCAGTTAATGCGCTTGATGGATCACCCAAACGTCATTTCCCTGAAGCACTGTTTCTTCTCTACCACAAGCCGAGATGAACTTTTTCTCAATTTGGTTATGGAATATGTCCCTGAAACATTGTACCGAGTTCTAAAACACTATACTAGTATGAACCAAAGGATGCCTCTCATCTATGTGAAACTTTATACATATCAAATCTTCAGGGGTCTAGCATACATCCATACAGTACCAGGAGTTTGCCATAGAGATGTGAAACCTCAAAATCTTTTGGTCGATCCTCTCACTCATCAAGTTAAGCTTTGTGATTTTGGGAGTGCAAAAGTTCTGGTCAATGGTGAATCAAACATTTCATACATATGTTCACGTTACTATCGGGCTCCAGAACTAATATTCGGTGCAACAGAATACACATCTTCTATTGATATTTGGTCAGCTGGTTGCGTCCTTGCTGAGCTGCTTCTAGGTCAGCCATTATTTCAAGGAGAAAATCAGGTGGACCAACTTGTGGAAATCATCAAGGTTCTTGGTACTCCAACTCGAGAAGAAATTCGTTGTATGAACCCTAATTATACGGATTTTAGATTCCCTCAGGTTAAAGCTCATCCGTGGCACAAGGTTTTCCACAAGCGAATGCCTCCTGAAGCAATTGACCTTATATCAAGGCTTCTCCAATATTCGCCAAGTCTTCGCTTCAATGCGCTGCAAGCATGTACACATCCTTTCTTTGATGATCTCCGGGAGCCCAATGCCCGACTACCCAATGGCCGTCCACTGCCCCCACTTTTCAATTTCAAACAGGAACTGTCCGGGCAATCGCCTGAAATGATAAATAGGCTCATCCCAGAGCATATTAGGCGGCAGATTGGTCTCACCTTCCCTCATCCGGCTAGTAAATAG 1227 0.458 MSSIPLGPPQHRPLVAAAPQLPPPLPVQAENDKEMSATVLEGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGEAVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSRDELFLNLVMEYVPETLYRVLKHYTSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVNGESNISYICSRYYRAPELIFGATEYTSSIDIWSAGCVLAELLLGQPLFQGENQVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQVKAHPWHKVFHKRMPPEAIDLISRLLQYSPSLRFNALQACTHPFFDDLREPNARLPNGRPLPPLFNFKQELSGQSPEMINRLIPEHIRRQIGLTFPHPASK 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0900 408 Pfam Protein kinase domain 68 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0900 408 SMART serkin_6 68 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0900 408 FunFam Glycogen synthase kinase-3 beta 52 147 - -
Lele31g0900 408 ProSiteProfiles Protein kinase domain profile. 68 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0900 408 FunFam Shaggy-related protein kinase kappa 148 395 - -
Lele31g0900 408 ProSitePatterns Protein kinases ATP-binding region signature. 74 98 IPR017441 GO:0005524
Lele31g0900 408 SUPERFAMILY Protein kinase-like (PK-like) 67 381 IPR011009 -
Lele31g0900 408 CDD STKc_GSK3 63 355 IPR039192 -
Lele31g0900 408 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 32 397 - -
Lele31g0900 408 Gene3D Transferase(Phosphotransferase) domain 1 148 395 - -
Lele31g0900 408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Lele31g0900 408 MobiDBLite consensus disorder prediction 1 27 - -
Lele31g0900 408 Gene3D Phosphorylase Kinase; domain 1 53 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0900 Lele-ChrLele31 16422434 16427073 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0900 72 390 MAP Kinase Gene Family AT3G59790 34.731 1.12e-55 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Lele31g0900 Pkinase 3e-64 CL0016