Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0887 ATGGATTCACAGCAGATTTTCGGTTACAGTGAGACTGATACTGGATTAATTAATTCATCATCATCTCATCCAGCTTTTTCGTCGGTACCCAGCTGGCTGCTTGAATCCTTGAAAATGGAGTTAGGAAACTCACCTAATTCCTCCTTTTCTAATAATCACTTTGATTCTGATTCTCTTTTAACATTGAGTGACAACCAGGATAATAATAAATACAGTTATGGTGAGATCCTTTCTGGTGCAAGCCCTTCTTGTGATTCTTCGCTGAAAACCAATCACAATTGGCACAATTCAACGCCGTCCATGGATTTTCGCCAAGATGGACCTTGTCCATATTCTTCTAGGAGCTCTCTTCTAAATGATGTGAACTGCAGCCAGAAAATCAGACATGTTCTGCAAGAAATAGAATCAACTCTAATGGCCCCTAAGAATGGTAATGATGCCACCTCATCAAATAGCCCGTTAATGACTTCTGGCCGTAGAAACATATCTTGGAGTCATCATGACCAAGGTTTACAGAATTTTCAAACTCGGCCATTTTTTGCTTCTAGTAGTAGTCAGCAGTTGAGCGAAGCTGCACAAGCAGAGAAACGTCACAAAGCAATAATAGAGGAAGAACTGGAGCGAGGTTTTGCACCAACAAGTAATTTGAGACTGTTGTTGATTGCATGCGCGAAAGCGCTTTCGGAAAACAACCTGAAAGATTTTGGTCAGTTGATTGAAAGGACTAGGAGTTCTGTGTCCATTACCGGCGAGCCAATCCAAAGGCTCGGTGCTTATTTGGTAGAAGGGCTTGTTGCAAGGAAGGAGGCATCCGGGAACAACATTTATCGTTCTCTCAAGTGCAAAGAGCCGGAAGGCAAAGACTTGCTCTCCTATATGCACATGCTGTATGAAATCTGCCCATACTTGAAATTCGGTTACATGGCCGCTAATGGATCCATCGCAGAAGCTTGCAGAAACGAGGACCGTATTCACATCATAGACTTTCAGATTGCTCAGGGAACTCAATGGGTGACTCTGCTTCAAGCCCTTGCAGAAAGACCTAGTGGGGCTCCTTATGTTAGGATCACAGGGATTGACGATCCTCTTTCTAAATACGCTCGTGGCGATGGGCTAGAGGCGGTTGGGAAACGGTTGGCCATGATCTCTGAGAAATTTCACATACCAGTTGAGTTTCATGGATTGCCAGTGTTTGGTCCTGATGTGACCCGGGACATGCTTGACATCCGGCCCGGCGAGGCTTTGGCCGTGAACTTTCCTTTACAGCTCCATCATACAGCTGATGAAAGTGTTGATGTGAATAATCCAAGGGATGGTCTTCTGAGAATGGTGAAATCATTATCTCCAAAGGTGGTCACATTGGTGGAACAGGAATCAAACACCAACACAACTCCTTTCTTCAACAGGTTCATAGAAACCTTGGATTACTACTTGGCACTGTTCGAGTCCATCGATTTCACGCTCTCGAGAGACAACAAGGCGAGGATTAACGTGGAGCAACATTGTTTGGCAAGGGATGTTGTGAATGTCATAGCTTGTGAAGGGAAGGAAAGGATAGAGCGACACGAACTGTTTGGAAAGTGGAAGTCAAGGTTGACAATGGCGGGTTTTCGACAATATCCGATGAGCACATATGTAAATTCTGTTATTCGGAGCTTGCTGAGATATCATTCAGAGAATTATACATTAGTGGACAAGGATGGTGCTATGTTGTTGGGTTGGAAGAGTAGACATCTGATATCAGCCTCAGCATGGCGTTGA 1761 0.4418 MDSQQIFGYSETDTGLINSSSSHPAFSSVPSWLLESLKMELGNSPNSSFSNNHFDSDSLLTLSDNQDNNKYSYGEILSGASPSCDSSLKTNHNWHNSTPSMDFRQDGPCPYSSRSSLLNDVNCSQKIRHVLQEIESTLMAPKNGNDATSSNSPLMTSGRRNISWSHHDQGLQNFQTRPFFASSSSQQLSEAAQAEKRHKAIIEEELERGFAPTSNLRLLLIACAKALSENNLKDFGQLIERTRSSVSITGEPIQRLGAYLVEGLVARKEASGNNIYRSLKCKEPEGKDLLSYMHMLYEICPYLKFGYMAANGSIAEACRNEDRIHIIDFQIAQGTQWVTLLQALAERPSGAPYVRITGIDDPLSKYARGDGLEAVGKRLAMISEKFHIPVEFHGLPVFGPDVTRDMLDIRPGEALAVNFPLQLHHTADESVDVNNPRDGLLRMVKSLSPKVVTLVEQESNTNTTPFFNRFIETLDYYLALFESIDFTLSRDNKARINVEQHCLARDVVNVIACEGKERIERHELFGKWKSRLTMAGFRQYPMSTYVNSVIRSLLRYHSENYTLVDKDGAMLLGWKSRHLISASAWR 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0887 586 Pfam GRAS domain family 217 586 IPR005202 -
Lele31g0887 586 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 178 582 IPR005202 -
Lele31g0887 586 ProSiteProfiles GRAS family profile. 207 586 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0887 Lele-ChrLele31 16328986 16330746 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0887 106 586 GRAS Transcription Factor Family AT5G48150 52.033 1.02e-171 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele31g0887 GRAS 2.4e-125 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g1123 17 21498055 21499650 Lele31g0887 31 16328986 16330746 hybridization
Lele30g0749 30 11928953 11931315 Lele31g0887 31 16328986 16330746 hybridization