Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele31g0886 | ATGAAAGACGAGTCGATAGGACTGATAATTGGAATTTCCATAGGTGTGGTTATTGGAGTGATTTTGGCTATTTCTGCACTGTTCTGTCTCAGATACCATAGGAAGCGTTCACTGGTTGGCAATAGCAGTTCCCGAAGGGCGGCCACCATACCAATCCGTGCCAACGGTGCTGATTCTTGTACTATTCTATCAGATTCAACACTAGGTTCAGAATCACCTGTGAAGTCTGGTAGGAGTGGCTCAGCCTACTGGGTTGATGGATTTAGGAAGAGTAGCATGGTTTCAGCATCTGGAATACCTGAGTATTCATACAAGGATCTGCAGAAGGCGACATATAATTTCACGACACTCATAGGACAAGGTGCATTTGGTCCTGTTTACAAAGCTCAGATGCCTACTGGGGAGACAGTTGCAGTGAAAGTTCTTGCAACTAATTCTAAGCAAGGGGAGAAAGAATTCCATACAGAGGTTATGTTATTGGGGAGGTTACACCATAGAAACCTGGTGAATTTAATTGGATATTGTGCAGAAAAAGGTCAGCATATGCTGATTTATGTGTACATGAGTAAAGGCAGCTTGGCTTCCCACTTGTATTGTGAAGAGAACAAGGCACTGAACTGGGATTTGAGGGTTCATATAGCCTTGGATGTGGCAAGAGGCTTAGAATATCTTCATGATGGGGCGGTTCCTCCTGTGATCCATCGAGATATCAAATCGTCGAATATTCTTTTGGATCATTCCATGCGAGCTCGGGTTTCGGATTTTGGGCTATCAAGAGAAGAGATGGTGGATAAGCATGCAGCTATAAGGGGAACCTTTGGGTATCTTGACCCTGAGTATATCTCTTCGGGCACTTTCACTAAAAAAAGTGATGTGTACAGTTTTGGGGTGTTGCTTTTTGAACTTATTGCCGGCAGAAATCCTCAACAGGGTCTCATGGAATATGTTGAGCTTGCAGCAATGAACACTGAGGGTAAAACTGGTTGGGAGGAGATTGCTGATGCTCGCCTCGAAGCGAAGTTCGAAGTTCAAGAGCTGAATGAGGTTGCAGCCCTTGCATACAAGTGCGTGAACCGTGGCCCAAGGAAACGCCCCTCAATGAGGGACATAGTGCAAGTGCTGACACGGATTCTGAAGTCGAGGCCCCCGAGGAGTCACCACCGGAAGGCCTTGTCGGCAACCACGGATGAAGTAGCTTCCATGGAGGGTGATCAGCCAGAAACAAAGGTTACAGTAACTGAGCACAGGCGAGAAGAGTCAATGGATAGTACAGTTGATGTCTATGAAGTATAG | 1293 | 0.4586 | MKDESIGLIIGISIGVVIGVILAISALFCLRYHRKRSLVGNSSSRRAATIPIRANGADSCTILSDSTLGSESPVKSGRSGSAYWVDGFRKSSMVSASGIPEYSYKDLQKATYNFTTLIGQGAFGPVYKAQMPTGETVAVKVLATNSKQGEKEFHTEVMLLGRLHHRNLVNLIGYCAEKGQHMLIYVYMSKGSLASHLYCEENKALNWDLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDHSMRARVSDFGLSREEMVDKHAAIRGTFGYLDPEYISSGTFTKKSDVYSFGVLLFELIAGRNPQQGLMEYVELAAMNTEGKTGWEEIADARLEAKFEVQELNEVAALAYKCVNRGPRKRPSMRDIVQVLTRILKSRPPRSHHRKALSATTDEVASMEGDQPETKVTVTEHRREESMDSTVDVYEV | 430 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele31g0886 | 430 | SMART | serkin_6 | 112 | 378 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lele31g0886 | 430 | CDD | STKc_IRAK | 118 | 377 | - | - | |
| Lele31g0886 | 430 | MobiDBLite | consensus disorder prediction | 408 | 424 | - | - | |
| Lele31g0886 | 430 | PANTHER | OS01G0750732 PROTEIN | 5 | 395 | - | - | |
| Lele31g0886 | 430 | FunFam | calcium/calmodulin-regulated receptor-like kinase 1 | 188 | 396 | - | - | |
| Lele31g0886 | 430 | ProSiteProfiles | Protein kinase domain profile. | 112 | 378 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lele31g0886 | 430 | Gene3D | Transferase(Phosphotransferase) domain 1 | 188 | 400 | - | - | |
| Lele31g0886 | 430 | Gene3D | Phosphorylase Kinase; domain 1 | 82 | 187 | - | - | |
| Lele31g0886 | 430 | FunFam | Calcium/calmodulin-regulated receptor-like kinase 1 | 86 | 187 | - | - | |
| Lele31g0886 | 430 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 232 | 244 | IPR008271 | GO:0004672|GO:0006468 | |
| Lele31g0886 | 430 | Pfam | Protein tyrosine and serine/threonine kinase | 114 | 374 | IPR001245 | GO:0004672|GO:0006468 | |
| Lele31g0886 | 430 | MobiDBLite | consensus disorder prediction | 381 | 430 | - | - | |
| Lele31g0886 | 430 | SUPERFAMILY | Protein kinase-like (PK-like) | 101 | 390 | IPR011009 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele31g0886 | Lele-ChrLele31 | 16317279 | 16320401 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele31g0886 | 102 | 374 | Glycoside Hydrolase | AT3G07070 | 46.207 | 2.13e-74 | 237 |
Transcription factors information