Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0878 ATGGAGAAGACGAAGATGAAGGGGCATGAGCAGATGAAGAAATCTAGGGTTATCAGAATAAACTCAGAGACTGAATGGGAAAATCAGATCACTGAAGCAACCAACCAAGCCTTCCCTGTCCTGGTTCACTTTTCTGCTTCCTGGTGTATGCCTTCTGTCGCCATGAATCCTTCCTTTCAAAACCTTTCTTCTTCATACCAACATGTCCTCTTCTTCATGCTTGATGTTGACGAGGTTCAGGAAGTAGCAACGAAGATGGAGATAAAAGCAATGCCAACATTTGTGATGCTAAGTGGAGGGAAGGAGATGGAGAGAGTAGTGGGTGCAAATCCTGAGGAGCTCAAGAAAAGAATCGATGCTTTTCTTACTCGCAACAACTCTCTCTAG 387 0.4419 MEKTKMKGHEQMKKSRVIRINSETEWENQITEATNQAFPVLVHFSASWCMPSVAMNPSFQNLSSSYQHVLFFMLDVDEVQEVATKMEIKAMPTFVMLSGGKEMERVVGANPEELKKRIDAFLTRNNSL 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0878 128 FunFam Thioredoxin 12 123 - -
Lele31g0878 128 PANTHER THIOREDOXIN 17 119 - -
Lele31g0878 128 SUPERFAMILY Thioredoxin-like 11 124 IPR036249 -
Lele31g0878 128 Pfam Thioredoxin 21 119 IPR013766 -
Lele31g0878 128 CDD TRX_family 25 119 - -
Lele31g0878 128 Gene3D Glutaredoxin 1 127 - -
Lele31g0878 128 ProSiteProfiles Thioredoxin domain profile. 6 123 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0878 Lele-ChrLele31 16269880 16272449 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0659 29 4124401 4126914 Lele31g0878 31 16269880 16272449 hybridization
Lele30g0740 30 11857424 11859224 Lele31g0878 31 16269880 16272449 hybridization