Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0855 ATGGCCCACAGATTCGATCCCCCGGAAGAATCCGAACCTCTACCGGAGACGGGAATGGACTCTCCGTCGTCCGGTGATGACATCAATACTGCAGCACCATCTCCCAAGAAAAGGTCAGATATGTTTCAATTTCCTCTCTTTCTTCTTGTTTTGTTAGTTAGGAAGGGGATAAAGAAGAAGGTGGTGATGGTACCGATCGGTGACGTGGAGGGATCTAAGAGCAGAGGCGAGACGTATCCACCGTCCGATTCTTGGGCTTGGAGAAAGTACGGCCAGAAGCCTATCAAAGGCTCTCCGTATCCCAGGGGATATTACCGATGTAGTAGTTCCAAGGGTTGTCCCGCCAGGAAACAGGTAGAGAGAAGCCGTGTGGACCCCACAAAGCTCATCGTCACCTACGCTCACAACCACAACCACTCCGTCCCGGCCGGCAGGCTTCACTCCGCCACCTCCCCCTCTTCCTCCTCCTCCGCTGTCACATCGGTTGCTGTTGCTTACGCTAACGACCCCATACCGACCGAATCGGACTCTAAAGTCGAATCGGAAGAGAATCTCACGGGGTTCTCGACCCATCCCGATCTAGAACTCGACGGCGACTCGGCTGTTCTGCTTGGCGACCACCATGGCCAATTCGGATGGTTCGATGACATGGCATCCACCATGAGAGTGCTGGAAAGCCCGATCTTCGGCGGAGAGTTGGAGGATGTGGCGTTGATGACGATGACGATGACGGAGGATGAAGACGAGTCGCTGTTCGCGGATCTCGGCGAGTTGCCGGAATGTTCGGTGGTTTTCCGGAGAAGGAATATTCCTAGATCGAGCGCGATCCAGTGCGGTGGGATCACAGGATAA 852 0.5458 MAHRFDPPEESEPLPETGMDSPSSGDDINTAAPSPKKRSDMFQFPLFLLVLLVRKGIKKKVVMVPIGDVEGSKSRGETYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTKLIVTYAHNHNHSVPAGRLHSATSPSSSSSAVTSVAVAYANDPIPTESDSKVESEENLTGFSTHPDLELDGDSAVLLGDHHGQFGWFDDMASTMRVLESPIFGGELEDVALMTMTMTEDEDESLFADLGELPECSVVFRRRNIPRSSAIQCGGITG 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0855 283 SMART WRKY_cls 81 141 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele31g0855 283 FunFam WRKY transcription factor 65 68 142 - -
Lele31g0855 283 Gene3D WRKY domain 69 143 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele31g0855 283 ProSiteProfiles WRKY domain profile. 82 142 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele31g0855 283 Pfam WRKY DNA -binding domain 83 139 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele31g0855 283 SUPERFAMILY WRKY DNA-binding domain 77 142 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele31g0855 283 MobiDBLite consensus disorder prediction 1 36 - -
Lele31g0855 283 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 21 263 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0855 Lele-ChrLele31 16118984 16120984 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0855 9 270 WRKY Transcription Factor Family AT3G58710 47.925 2.29e-68 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele31g0855 WRKY 1.6e-24 CL0274