Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0847 ATGGCGGATGAAGAATTTCAAGCAAGTGGAAACTGGTGGGACTCATCTTCAAGAAATGTGAGATTCGAAACGGCTCCTTCCCACTCATCTCCCTTCCCTAATAACTTCACTTGGCAACATCAAATAGATCATCATCATCACGACCACCTCAAGCCTACCTCTGATTCTCCCACCACCATGATCATGGGCTTAGGCCTCTCCTCAAACCCCATCGATTGGCATAACCAGAATCATCTTCTAGCAGAAGAGAAGGGTGTGGTCTCCGATGGCCGATTCAGATCCATGTTTCAAGAGAACAATAATCTGAGTTCTTCAGGAGGAAGCGCTAATTTTCATCAGCAAGTTGAGTGGAGAGAGAAGCTTTTGTTTTCAACTGATTCGTCTTCTACTACTACCACTGATAATAATAATCAGTACAGTACCACTTCTGGAGATAGTATAGTGACCACCAGCCATGGCTTAGCTTCTAGTTTCCACATGGATTCTTCTGCGAATCCTTCATTATTACAGGGATTGTTATTAGCTTCTGAAACTTCTTCTTCCTCCTCCTTCGACAATAATAATCATCATCATAATCGCTCCTGCTTCAACTTTCCCTATAATAATGATCAGTCAATGCCTTCTTGGCCTAAGGTTTCTCAGTTTCTTAGGGCCTCTTCGCCGCCCAAACAAACACAACATCACGGCGGCAGCGGCGGCAATAGCCAATTGCAGTTTACGAACAACACGACCTTCTGGAACGCTTCTGAAGTTAATCATCATCATCATCATGCCGCCATTAAAGAACCTACTCGACCTTCCTTCTTCCCTAATTCCTTGCAGGCTCCTTTTCATCACTCGCCGAATTTTGATGCACAATCAAAGAATATTTGTGGAGGAAGAGAAACGAGTAGTGTGGGGAAGAAAAGTGGTGGAGAGACAGCACCAAAAAGGGCTAGAAATGAAACCTCATCGACTTTGCCACCTTTTAAGGTGAGAAAAGAGAAGATGGGGGACCGAATTACTGCTCTTCAACAGTTGGTTTCGCCTTTCGGGAAGACTGATACAGCCTCAGTGCTCTCTGAAGCCATTGAGTATATCAAATTCCTCCACGAACAAGTCTCTGTTTTAAGCAGCCCGTATATGAAAACTGGAGCTCCATTACAGCACCCCCAGAGTTCTGGTAAATGTAAGGAAGGTGGGGAAGCCCTAAAACAAGACCTGAGAAGCCGAGGGTTGTGTTTGGTGCCAGTTTCAAAATCTTATAAAGTCAGGTTTGGAATGATGAGAAGATGGCAAGGAGAAACGGGAAAGAGGACACAGAGGCCACACAAATTTGGCAACTTGTTGATTGTGCTCATGGAAGACAAGAAAAGAAAGGAAAAGAAAAGAGTGTTGGAAAATGTGTTGAAAGAGAAAGAAAAGGAAATGACCCTCCAAAAGAGAGGCCCTTCTTGA 1437 0.4405 MADEEFQASGNWWDSSSRNVRFETAPSHSSPFPNNFTWQHQIDHHHHDHLKPTSDSPTTMIMGLGLSSNPIDWHNQNHLLAEEKGVVSDGRFRSMFQENNNLSSSGGSANFHQQVEWREKLLFSTDSSSTTTTDNNNQYSTTSGDSIVTTSHGLASSFHMDSSANPSLLQGLLLASETSSSSSFDNNNHHHNRSCFNFPYNNDQSMPSWPKVSQFLRASSPPKQTQHHGGSGGNSQLQFTNNTTFWNASEVNHHHHHAAIKEPTRPSFFPNSLQAPFHHSPNFDAQSKNICGGRETSSVGKKSGGETAPKRARNETSSTLPPFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSVLSSPYMKTGAPLQHPQSSGKCKEGGEALKQDLRSRGLCLVPVSKSYKVRFGMMRRWQGETGKRTQRPHKFGNLLIVLMEDKKRKEKKRVLENVLKEKEKEMTLQKRGPS 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0847 478 MobiDBLite consensus disorder prediction 267 303 - -
Lele31g0847 478 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 314 363 IPR011598 GO:0046983
Lele31g0847 478 FunFam Transcription factor bHLH123 family 324 386 - -
Lele31g0847 478 MobiDBLite consensus disorder prediction 254 323 - -
Lele31g0847 478 Gene3D - 324 383 IPR036638 GO:0046983
Lele31g0847 478 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 324 382 IPR036638 GO:0046983
Lele31g0847 478 CDD bHLH_AtbHLH_like 320 371 IPR045239 -
Lele31g0847 478 MobiDBLite consensus disorder prediction 126 146 - -
Lele31g0847 478 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 146 413 - -
Lele31g0847 478 SMART finulus 325 369 IPR011598 GO:0046983
Lele31g0847 478 MobiDBLite consensus disorder prediction 217 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0847 Lele-ChrLele31 16017049 16020191 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0847 237 417 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 57.065 3.58e-50 174