Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0840 ATGGAGAGTTTCAGAGTTCTGTATCTGTTCTCCTTGATGCTATGCTTCATAAAACCGCTCACTTCACGAGACAGTATCAGCCCAGGAAACTTGATTGGAGATGGTGAGACTTTAGTTTCCGCAAGTGGGTTTTTTGAACTCGGATTCTTCAGCCCTGGGTCTTCAAATGCCCTATACTTGGGAATTTGGTATAATAACTCTCCTTCTACAATCTTCTGGGTGGCCAACCGAGATAAACCTCTTAACAACGATAAGGGAAAGGGTGTTTTACAATTAAATGATCAAGGAGTTCTCCTTCTTCTTGATGCCACAAACAACAACACAGTGTGGTCCTCCAATTATTCATCAATCAGAGCATATAACCCTTTTGCTCAGCTCTTGGATTCGGGAAATCTTGTGGTGAAAAATGGTAACTTGGACCAACTCTTATGGCAGAGTTTTGACCACCCTTGTGACACCTTAATGCCAGGAATGAAAATTGGGTGGGGTCAAGAAACGGGTTTGGATAGATTTCTGTCATCTTGGAAAAGTTCAGATGATCCAGGTCGGGGAGATTATGTACTCAAAATAGACCGTAGAGGGTACCCACAAATCTTTTTACTGAGTGGTTCTATGGTGATGGTTAGAGCAGGGTCATGGAATGGCCTCACTTTCACGGGATTTTCGAGTCAAATTCCGGATCCAGTAAGGAATTCTGAGTTTGTGCTGAATGAAAAAGAGGTATATCACAAGTTTGATCTTACAAATGATTCAGTTTTCTCTCGATATATAATGACTCCTTCAGGCATAGGGCAGCGTTTTGATTGGGTCATTCAAACAAACACCTGGCGGGTGATGAACACTGGTCTCCCTGACCAATGTGAAAATTATGCCTTGTGCAGTGCAAATTCTATCTGCAACATTAGTAACAATCTTGTTTGTGAATGCCTGAGAGGGTATGAACCCACTAATTTTAGGGAATGGAATGTGTCTGATTGGAGCAGTGGCTGCAGTAGAAGGGATTCTTTGGATTGTGATGCTAGTGATGGATTTAAGCAGTATAAGGGCATCAAGTTGCCAGACACTTCTTCTTCATGGTATAACAAGACCATGGACATTGAGGAATGTAAGAGATTATGTCTGCAAAACTGTTCTTGTAAAGCATATTCAAATTTGGATATTCGAGGTGAAGGAAGTGGTTGCCTGATATGGTTTGATCAACTATTGGACATGAGACAATTTCCTTCAGGGGGACAAGACCTCTACGTACGAGTTCCTGCTTCAGAGCTAGATCATTTTAGGGATGAAGGCCGGGGGAGCATTGGCAAGAAGAAGCTAGTAGGAATTGTGGTTGGCTGTGCAATATTTGTAATGAGTTTCATGATCGGATTGATTTTATTTGCAAGGAAAAGGAAACTTGGAAATTCAGGGAATGAAGTCATGGATATTCCAACTTTTGATCTGTCAGTCATAGCCAAGGCTACTGATAATTTTTCTACCATCAACAAATTAGGTGAAGGTGGCTTTGGGACAGTATACAAGGGTACTCTAGAAGATGGGCAAGAGTTAGCTGTGAAAAGGCTGTCAACAAAATCTGGTCAAGGGCTGGAAGAGTTGAAAAATGAAGTTATGCTGATAGCAAAACTTCAGCACCGTAATCTTGTGAAGCTTCTTGGTTGCTGCATTGAAGGAGAAGAGAAGTTGTTGATTTATGAATATATGCCAAACAAGAGCTTGGACCACTTTATTTTTGATGAAACTCGTTGCAACTTGTTGAATTGGCTGAAGCGTTGGCATATTATTCACGGGATTGCTCGAGGACTTGTCTATCTTCATATAGATTCCAGATTAAGAATTATTCATAGAGACCTTAAAACAAGTAATATTTTGCTAGATGCTTACATAAATCCGAAAATATCAGACTTTGGCCTGGCTCGCACATTCTGGGATGATCAGGTCGTTGCCAAAACTAAGAAAGTTGTTGGAACATTTGGATATATGCCTCCTGAATATACTGTGCATGGACAATTTTCAATGAAATCCGATGTCTTTAGCTTTGGTGTAATAGTACTGGAAATTGTTAGTGGGAAGAAGAACAGAGTATTTTCCGACCTAGAATACTATCTTAATCTTCTTGGACATGCATGGAAACTGTGGATCCAAGGAAGACCAATGGAGCTATTGGATGAATGCTTAAAGGAAAGTTGCAGTGAATCTGAAGTCATAAGGTGTATACAGGTAGGACTATTATGTGTGCAACAAAGAGCTGAAGATAGGCCTGATATGTCTGCTGTCGTTCTAATGTTAAATGGAGAGAAATTGTTGCCACAGCCAAAAATTCCTGCTTTTTACACTGCAAGTGATGTTCCTCCTGATCCTACTTCTTTAGACCAAAGATTTGTACAGTTCTCACAAAATGAAATTTCTCAAACCATGCCAGAGGGAAGATGA 2430 0.4049 MESFRVLYLFSLMLCFIKPLTSRDSISPGNLIGDGETLVSASGFFELGFFSPGSSNALYLGIWYNNSPSTIFWVANRDKPLNNDKGKGVLQLNDQGVLLLLDATNNNTVWSSNYSSIRAYNPFAQLLDSGNLVVKNGNLDQLLWQSFDHPCDTLMPGMKIGWGQETGLDRFLSSWKSSDDPGRGDYVLKIDRRGYPQIFLLSGSMVMVRAGSWNGLTFTGFSSQIPDPVRNSEFVLNEKEVYHKFDLTNDSVFSRYIMTPSGIGQRFDWVIQTNTWRVMNTGLPDQCENYALCSANSICNISNNLVCECLRGYEPTNFREWNVSDWSSGCSRRDSLDCDASDGFKQYKGIKLPDTSSSWYNKTMDIEECKRLCLQNCSCKAYSNLDIRGEGSGCLIWFDQLLDMRQFPSGGQDLYVRVPASELDHFRDEGRGSIGKKKLVGIVVGCAIFVMSFMIGLILFARKRKLGNSGNEVMDIPTFDLSVIAKATDNFSTINKLGEGGFGTVYKGTLEDGQELAVKRLSTKSGQGLEELKNEVMLIAKLQHRNLVKLLGCCIEGEEKLLIYEYMPNKSLDHFIFDETRCNLLNWLKRWHIIHGIARGLVYLHIDSRLRIIHRDLKTSNILLDAYINPKISDFGLARTFWDDQVVAKTKKVVGTFGYMPPEYTVHGQFSMKSDVFSFGVIVLEIVSGKKNRVFSDLEYYLNLLGHAWKLWIQGRPMELLDECLKESCSESEVIRCIQVGLLCVQQRAEDRPDMSAVVLMLNGEKLLPQPKIPAFYTASDVPPDPTSLDQRFVQFSQNEISQTMPEGR 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0840 809 SMART ntp_6 339 418 IPR003609 -
Lele31g0840 809 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 752 - -
Lele31g0840 809 ProSiteProfiles Bulb-type lectin domain profile. 23 147 IPR001480 -
Lele31g0840 809 Gene3D Phosphorylase Kinase; domain 1 460 566 - -
Lele31g0840 809 CDD B_lectin 30 150 IPR001480 -
Lele31g0840 809 SUPERFAMILY Protein kinase-like (PK-like) 471 762 IPR011009 -
Lele31g0840 809 Gene3D Hepatocyte Growth Factor 334 415 - -
Lele31g0840 809 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 147 - -
Lele31g0840 809 CDD STKc_IRAK 497 764 - -
Lele31g0840 809 CDD PAN_AP_plant 336 419 - -
Lele31g0840 809 ProSiteProfiles Protein kinase domain profile. 491 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0840 809 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 567 770 - -
Lele31g0840 809 SMART serkin_6 491 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0840 809 SMART blect_4 29 150 IPR001480 -
Lele31g0840 809 PIRSF SRK 1 809 IPR024171 GO:0004674
Lele31g0840 809 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 459 566 - -
Lele31g0840 809 Gene3D - 19 147 IPR036426 -
Lele31g0840 809 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 181 IPR036426 -
Lele31g0840 809 ProSitePatterns Serine/Threonine protein kinases active-site signature. 612 624 IPR008271 GO:0004672|GO:0006468
Lele31g0840 809 Gene3D Transferase(Phosphotransferase) domain 1 567 769 - -
Lele31g0840 809 Pfam PAN-like domain 338 404 IPR003609 -
Lele31g0840 809 Pfam D-mannose binding lectin 70 176 IPR001480 -
Lele31g0840 809 ProSiteProfiles PAN/Apple domain profile. 338 419 IPR003609 -
Lele31g0840 809 Pfam Protein tyrosine and serine/threonine kinase 493 760 IPR001245 GO:0004672|GO:0006468
Lele31g0840 809 ProSitePatterns Protein kinases ATP-binding region signature. 497 519 IPR017441 GO:0005524
Lele31g0840 809 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 337 418 - -
Lele31g0840 809 Pfam S-locus glycoprotein domain 209 316 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0840 Lele-ChrLele31 15955226 15959452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0840 479 805 Receptor kinase-like Gene Family AT4G11480 55.015 1.07e-119 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele31g0840 PK_Tyr_Ser-Thr 2.2e-46 CL0016