Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0823 ATGCTTGAATCGCTCCAGCGGAGAGACGAAGAAGAGAATAAGCCAAAGGACTTGCCGCCAGCATTGCCAGCTCGTCCGACCTCCAAAGCTCGGCTGCCCTCAGCGAGAAGGTCATTGCCGAATAACTTCAACTTCAAGGTTAATGGAGATCCTGGTGAGACAGAATGCCTTCCGAACGGATTTCATGATGTGAACGAAGAGACTAAGAGGAAAGTTACAGTTGATTTGGGACACAAGAGAAACGGAAGCCTCGAGAACAAGAAGTTGAAGAGGGATGTGGAATCGCCGTACGCCCTCGCATCAGAAGAGAACCAGAGTGATCAAATATCATCGAGGAGTCGAGAATCCATCTCGGATGATATCGTTACTTATTTCATCAATATGAAACTTCATGTTTGGTGTAGGCAACCAAATGGGCACCAGGGACTAGGAAAGATACAGTCAGCTTCAAAAGAAGAAGCTTCAGTTTTACTCACAAATGGAAATGTTATGAAAGTGGCCAGATCAGAGCTCCTACCAGCTAATCCAGATATTTTAAAAGGCGTGGATGATCTCATACAGCTGAGTTATCTGAATGAGCCTTCAGTTCTTCACACTCTTCGTTTTAGATATTCTCAAGAAATGATTTATAGTAAAGCAGGACCCATTTTAATAGCACTCAATCCCTTCAAAGATGTCCAGATTTGTGGAAATGATCATGCCACAACTTATAGGAAGAGATGCATGACTAACCCACATGTTTATACCGTGGCAAATGCAGCTTTTATTGAGATGATGAGAGGTAAAGTAAATCAGTCCATCATCATAAGTGGTCAGAGTGGATCTGGGAAGACAGAGACAGCAAAAATCGCTATGCAGCATTTGGCTGCTCTGGGTGGTGGAAGCTGTGGCATAGAAAATAAAGCTCTTCAGACACATTTTATTCTAGAAGCTTTTGGGAATGCAAAAACACCAAGGCACAATAATTCTAGCAGATTTGGGAAGTTAATGGAGATTCATTTCACTGCAGCAGGGAAAATATGTGGAGCTAAAATTCAAACCTTCATGTTACAAAAGTCAAGAGTTGTTCAGCTAACCAGTGGTGAGAGGTCATATCACATCTTTTATCAACTTTGTGCTGGATCACTACCTGGTCTTAAAGAGAGGCTGAATCTTAGAGAGGCCAGCGAATATAAATATCTTAATCAGAGTGACTGTATGACAATAGATGGCGTTGATGATGCTAAGATGTTTAGTAAGCTGCTGAAAGCGCTGGATGTTGTTCAAATTTGCAAAGAGGATCAAGAGCTAGTATTTAAAATCCTTGCTGCAATATTATGGCTTGGAAATGTATCATTTCAAATATCTGACAATGAAAATCATGTTGTGGTGGTGGATAATGAAGCTGTCACCAGTGCTGCCATGCTGATGGGTTGCAGTCCCCGAGAGTTAATAGTAACTTTATCTGCTTGTAAAGTCCAAGCTCGCAAGGATACTATTACTAAAAGTTTGACATTGAAGCAGGCAATTGAAACAAGAGATGCGTTGGCACAATTTATGTATGAAAGCTTGTTTGGGTGGCTCATAGAAAAAATTAACAAGTCACTTGGAGCTGGCAAACGGCATACTGGGAGATCCATAAATATTCTTGATATTTGTGGGTTTGAGTCATTCAAGAAAAACAGCTTCGAACAATTTTGTGTGAATTATGCTAATGAGAGGCTTCAACAACATTTCAATCGGCATATATTTAAACTTGAGCGGGAGAACTGCGAAATGGACGGTGTTCATTGGACTAAAGTAGATTTTGAGGACAATCAAGAGTGCTTGGATCTATTTGAGAAGAAACCATCAGGAATACTTTCATTATTGGATGAGGAATCAAATTTACCCAAGGCCACTGATCTCACGTTCGCCAACAAACTTAAACAGCACCTGAATGCTAATCCTTGCTTTAAAGGGGAAAGAGGGCGGGCTTTTGGTGTTCGTCACTTTGCAGGAGAGGTTTTGTATGATACCAACGGCTTTTTACAGCAGAACAAAGATCTGCTGCCTTCTGATTACATACAACTCCTGGCATCATGTAGCTGTCAACTGCTGCAGTTGTTCTCGAAAATGCATAGCCAAACACAGAAACAATTGAATTCCTTACAAATGGGTGCATTAGACTCACAGAAGCAGAGTGTTGGTGCAAAGTTCAAGGGTCAATTGTTTGAATTAATGCACCAATTGGAGAACACCACACCTCATTTTATTCACTGCATAAGGCCAAATGCTAAGCAGCTTCCTGGGATATTTGATGAAGATCTTGTCATGCAACAACTCCGTTGCTGTGGAGTCTTGGAGTCTATTAGACTTTCAAAGATTGGATATCCTATCCAAATGACGCATGAAGAGTTCTCTGAAAGGTATGGGTTTCTACTTTTTGAGCCCAAAGTATTTCAGGATACATTGAGCATCTCAGTTGCCGTATTGCGACAATTTAATATCCCTCCTGAAATGTATCAGTTTGGCTACACCAAAGTGCATTTGCGAAAAGGGCAGATTGATGCATTGGAGGATAGAAGAAAGCAGGTTATGCAGGGAATACTTCAGGTTCAAAAATGGTTCCGTGGTCATCAAGCCCGTCGATATTTCCATGAACTTAAGAATGGAGTGATGACATTGCAATCATTTGCTCACGGAGAAATTTTGAGGAGGAAATATGGTGTAGTTGAAAAGTCTTCTATGCCTGTTAATTGTAAAAATTTTGAGGAGATTGAGGCAATCATACTGCTACAATCAGTAATTCGTGGCTGGCTGACTAGGAGGAGGAATGCCAGTGGTTTGCATAAGGTGAAGAAACACCCTAATAATGAAAAACTTCAGCGATATTCTCGTGTGAAGATGCTAGATATGAAGGAAGCGTCCAGAGAGCAGGTTCAGAATTTGCCTTCAGCTTTAGAAGAACTCCGAAGGCGGGTACTTAAGGCTGAGGCAACTCTTGAGCAAAAGGAAGAGGAAAATACTGCATTGAGGGAACAGCTGAAACAAAACGAATCAAAATGGATTGAATATGAGGCGAGGATGAAATCAATGGAGGAGACGTGGCAAAAACAGATGGCATCTTTGCAAGTGAGTCTTTCTGCTGCTAGAAAGAGCCTTGCTTCTGACAACACCACTGCTTATCCTGGAAGACAAGAAGCTTTGTCACCTCGTTACAATGATTCTGAAGATTTTAATTCCATAATATCTCGAACTCCTGGTGGGAGCCCACCTATCAAGTTTTCCAGCTCTCTCTCCGTCTCCGATTCTGGAGCGGCAGGAAGAGAAGTTAACGGTACACTTTCTGCAGTCAGCAATCTGATGAGGGAATTTGAACAGAGAAGACAGACTTTTGATTGCGATGCGAGGGCTCTGCTCGATGCCAAGTCCGGGCAGTCTGTTATCATCACGAATCCGGATGAAGAACTCAGGAAACTTAGACATAGGTTCGAGGGATGGAAGAAAGAATACAAGTTTAGATTACGGGAGACGAAAGCAAGGCTTCATAAAGTAGGGAATTCAGAAGGGGAAAAGAGCCGTCGGAGATGGTGGGGGAAGTTAAGCTCAAGAGCCTCATAG 3582 0.4196 MLESLQRRDEEENKPKDLPPALPARPTSKARLPSARRSLPNNFNFKVNGDPGETECLPNGFHDVNEETKRKVTVDLGHKRNGSLENKKLKRDVESPYALASEENQSDQISSRSRESISDDIVTYFINMKLHVWCRQPNGHQGLGKIQSASKEEASVLLTNGNVMKVARSELLPANPDILKGVDDLIQLSYLNEPSVLHTLRFRYSQEMIYSKAGPILIALNPFKDVQICGNDHATTYRKRCMTNPHVYTVANAAFIEMMRGKVNQSIIISGQSGSGKTETAKIAMQHLAALGGGSCGIENKALQTHFILEAFGNAKTPRHNNSSRFGKLMEIHFTAAGKICGAKIQTFMLQKSRVVQLTSGERSYHIFYQLCAGSLPGLKERLNLREASEYKYLNQSDCMTIDGVDDAKMFSKLLKALDVVQICKEDQELVFKILAAILWLGNVSFQISDNENHVVVVDNEAVTSAAMLMGCSPRELIVTLSACKVQARKDTITKSLTLKQAIETRDALAQFMYESLFGWLIEKINKSLGAGKRHTGRSINILDICGFESFKKNSFEQFCVNYANERLQQHFNRHIFKLERENCEMDGVHWTKVDFEDNQECLDLFEKKPSGILSLLDEESNLPKATDLTFANKLKQHLNANPCFKGERGRAFGVRHFAGEVLYDTNGFLQQNKDLLPSDYIQLLASCSCQLLQLFSKMHSQTQKQLNSLQMGALDSQKQSVGAKFKGQLFELMHQLENTTPHFIHCIRPNAKQLPGIFDEDLVMQQLRCCGVLESIRLSKIGYPIQMTHEEFSERYGFLLFEPKVFQDTLSISVAVLRQFNIPPEMYQFGYTKVHLRKGQIDALEDRRKQVMQGILQVQKWFRGHQARRYFHELKNGVMTLQSFAHGEILRRKYGVVEKSSMPVNCKNFEEIEAIILLQSVIRGWLTRRRNASGLHKVKKHPNNEKLQRYSRVKMLDMKEASREQVQNLPSALEELRRRVLKAEATLEQKEEENTALREQLKQNESKWIEYEARMKSMEETWQKQMASLQVSLSAARKSLASDNTTAYPGRQEALSPRYNDSEDFNSIISRTPGGSPPIKFSSSLSVSDSGAAGREVNGTLSAVSNLMREFEQRRQTFDCDARALLDAKSGQSVIITNPDEELRKLRHRFEGWKKEYKFRLRETKARLHKVGNSEGEKSRRRWWGKLSSRAS 1193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0823 1193 MobiDBLite consensus disorder prediction 1171 1193 - -
Lele31g0823 1193 Pfam Myosin head (motor domain) 182 838 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele31g0823 1193 FunFam Myosin heavy chain 363 419 - -
Lele31g0823 1193 Pfam IQ calmodulin-binding motif 914 931 IPR000048 GO:0005515
Lele31g0823 1193 Pfam IQ calmodulin-binding motif 856 873 IPR000048 GO:0005515
Lele31g0823 1193 ProSiteProfiles IQ motif profile. 912 941 IPR000048 GO:0005515
Lele31g0823 1193 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 932 IPR027417 -
Lele31g0823 1193 ProSiteProfiles Myosin motor domain profile. 180 850 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele31g0823 1193 Gene3D - 783 851 - -
Lele31g0823 1193 SMART MYSc_2a 174 851 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele31g0823 1193 CDD MYSc_Myo8 194 838 IPR036022 -
Lele31g0823 1193 FunFam Unconventional myosin-XIX 551 740 - -
Lele31g0823 1193 MobiDBLite consensus disorder prediction 1 62 - -
Lele31g0823 1193 Gene3D - 549 740 - -
Lele31g0823 1193 MobiDBLite consensus disorder prediction 1 18 - -
Lele31g0823 1193 Coils Coil 960 1008 - -
Lele31g0823 1193 Gene3D Myosin VI head, motor domain, U50 subdomain 424 718 - -
Lele31g0823 1193 MobiDBLite consensus disorder prediction 1171 1185 - -
Lele31g0823 1193 PANTHER MYOSIN 173 1185 - -
Lele31g0823 1193 Gene3D - 363 422 - -
Lele31g0823 1193 ProSiteProfiles IQ motif profile. 853 881 IPR000048 GO:0005515
Lele31g0823 1193 SMART iq_5 874 896 IPR000048 GO:0005515
Lele31g0823 1193 SMART iq_5 911 933 IPR000048 GO:0005515
Lele31g0823 1193 SMART iq_5 851 873 IPR000048 GO:0005515
Lele31g0823 1193 Gene3D Kinesin motor domain 183 778 IPR036961 -
Lele31g0823 1193 MobiDBLite consensus disorder prediction 34 48 - -
Lele31g0823 1193 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 127 176 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lele31g0823 1193 Gene3D - 854 903 - -
Lele31g0823 1193 PRINTS Myosin heavy chain signature 264 289 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele31g0823 1193 PRINTS Myosin heavy chain signature 592 620 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele31g0823 1193 PRINTS Myosin heavy chain signature 539 567 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele31g0823 1193 PRINTS Myosin heavy chain signature 307 334 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele31g0823 1193 PRINTS Myosin heavy chain signature 210 229 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0823 Lele-ChrLele31 15847772 15856366 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0823 1 1187 Myosins gene family AT5G54280 58.340 0.0 1390