Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0800 ATGGCATCCTCACTTTTCAAGTTCACTGTCTTCCTCTTCATTGCCCTCGTCCTTCTCTCTCCCCACGAGAACAATGTCGCAGAAGCAAAACTTTGCGAGAAACTGAGCAAAACATTTTCTGGGGTTTGTATCCGCAAGAAACCGTGTAAGACAGCATGTTCAAAAGAGGGTGCTGTTGATGGAAGTTGTCATACTCATGGTATTGGAAGTGCTTGCTTTTGCTACTTCAAGTGTGTTGAGGGAAGCTAA 249 0.4458 MASSLFKFTVFLFIALVLLSPHENNVAEAKLCEKLSKTFSGVCIRKKPCKTACSKEGAVDGSCHTHGIGSACFCYFKCVEGS 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0800 82 SUPERFAMILY Scorpion toxin-like 29 78 IPR036574 -
Lele31g0800 82 Gene3D - 28 78 IPR036574 -
Lele31g0800 82 ProSitePatterns Gamma-thionins family signature. 30 53 IPR008176 GO:0006952
Lele31g0800 82 Pfam Gamma-thionin family 30 78 - -
Lele31g0800 82 PANTHER DEFENSIN-LIKE PROTEIN 1 1 78 - -
Lele31g0800 82 SMART gth_4 31 78 IPR003614 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0800 Lele-ChrLele31 15683955 15684457 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0800 1 78 Plant Defensins Gene Families AT1G19610 39.241 2.53e-14 60.1