Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0796 ATGGAGAGTACCGAATCGTCTACCGGTTCGCAGCAGCCGAACCTTCCTCCGGGATTCCGGTTCCACCCGACAGACGAAGAGCTCGTCGTTCACTACCTGAAGAAGAAGGCCTCCTCTGCTCCTCTCCCCGTCGCGATCATCGCCGAAGTTGATCTCTACAAGTTCGATCCGTGGGAACTCCCAGCTAAGGCAGCGTTTGGAGAGCAGGAATGGTACTTTTTTAGTCCGAGGGATAGGAAGTACCCGAACGGAGCTAGGCCAAACAGGGCAGCAACGTCTGGGTATTGGAAAGCTACAGGAACTGATAAGCCCGTGTTGACATCTAATGGAAACCAGAAGGTAGGGGTGAAGAAAGCTTTGGTTTTCTATGGAGGGAAGCCACCAAGAGGGATCAAAACCAACTGGATCATGCATGAATATAGGCTTGCTGATAATAAGCCTAACAATAAACCTCCTGGTTGTGACTTGGGCAACAAGAAAAACTCTCTCCGGCTAGACGACTGGGTGCTGTGCCGGATATACAAGAAGAGCAACACACATAGATCGCCGATGGATCACGATGATTCATCGATGGATGATATGATTGGAGGGGTTCCTCCTTCGATCTACGTTGGACAGATGAACGCCAGATTCAATCTTTCTAAGATGTCTACAACCTACGGCGGCGGTGGGGGTGGCGTAGGAGGAGGAGGGGGATTGTTATTGCTAGACACAAACCACGACCACAACTTACTGGAAGGGGTTGTCGTCGCCAGCAACACCAACAACAATGGAATCAACAACCCAGAAGTTCCTAGTTTGGTCACTACTATGGCTCCTTCAAACCTTACTACTTCTGTTACAACCCTACCTTCTAAACGAACACTGCCATCGCTGTATTGGAGCCCAGACGAGGATTTGGACGGAACCTCTTCGAAAAGATTGAGCTTGGACAATAATGAGAATGGAGGGTGCAGTGGCGGAGTTCGCGGCGGCGGTGGCGTCGAGGTTACTACTGCTGGAGCTAGTTCTATTGCTTCTCTGCTAAACCAGCTTCCACAGACTCCTTCAATGGTGGGATCTATAGGAGATGGAATGTTTCGGGCACAGTATCATCAAAATCCTGGAATGCATTGGTTTGGAGAATTGCTTAATGGGTTACTGAGATTTCGGTTTTCTTTTGGAGATTATTGGATGAAGGGAGTAATTAATCATCAGTTTGATGATCTCAGAGATTGA 1218 0.4877 MESTESSTGSQQPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVAIIAEVDLYKFDPWELPAKAAFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSNGNQKVGVKKALVFYGGKPPRGIKTNWIMHEYRLADNKPNNKPPGCDLGNKKNSLRLDDWVLCRIYKKSNTHRSPMDHDDSSMDDMIGGVPPSIYVGQMNARFNLSKMSTTYGGGGGGVGGGGGLLLLDTNHDHNLLEGVVVASNTNNNGINNPEVPSLVTTMAPSNLTTSVTTLPSKRTLPSLYWSPDEDLDGTSSKRLSLDNNENGGCSGGVRGGGGVEVTTAGASSIASLLNQLPQTPSMVGSIGDGMFRAQYHQNPGMHWFGELLNGLLRFRFSFGDYWMKGVINHQFDDLRD 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0796 405 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
Lele31g0796 405 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Lele31g0796 405 MobiDBLite consensus disorder prediction 1 17 - -
Lele31g0796 405 Gene3D NAC domain 24 181 IPR036093 GO:0003677|GO:0006355
Lele31g0796 405 SUPERFAMILY NAC domain 7 176 IPR036093 GO:0003677|GO:0006355
Lele31g0796 405 FunFam NAC transcription factor 56 24 181 - -
Lele31g0796 405 PANTHER NAC TRANSCRIPTION FACTOR 56 15 190 - -
Lele31g0796 405 MobiDBLite consensus disorder prediction 1 20 - -
Lele31g0796 405 MobiDBLite consensus disorder prediction 303 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0796 Lele-ChrLele31 15651499 15653184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0796 1 373 NAC Transcription Factor Family AT3G15510 52.699 2.01e-123 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele31g0796 NAM 8.6e-40 No_clan