Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0795 ATGGTAGAGCTAATTGCTTTAGCGGCTCAGATAATGGGAAATTCGCCCTTTGTCCTTGACGAGTATATGCATTGCACCGCCGTAAATGGGTTCAGTCCATCAGATAAGTATGGCAAAGATGACCGCACTTATCTCGGGAAAAAATATCCACAGGAGTTCAAGCTGCTTCTTCGATTTTCTTCATTGTGTGTATGTGTAAGAATGGGAGTTCCAGCGACCGACACGCTTGCTCAACTGAGTTTGCCTCCGGGTTTTCGGTTTTACCCTACCGATGAGGAGCTTCTGGTTCAGTATCTATGCCGGAAAGTAGCCGGCCACAATTTCTCTCTGCAAATTATCGGCGAGATCGACTTGTACAAGTTCGACCCATGGGTCCTACCAAGCAAGGCGATTTTTGGTGAGAAAGAATGGTATTTTTTCAGCCCCAGAGACCGGAAGTATCCGAACGGGTCGCGACCCAACAGAGTTGCTGGGTCTGGATACTGGAAAGCCACCGGAACCGATAAGATCATTACCACCGAAGGCCGGAAGGTTGGCATCAAGAAAGCTCTCGTTTTCTACGTTGGAAAAGCACCCAAAGGCACCAAAACCAATTGGATCATGCACGAGTATCGCCTTCTCGAAAATTCCAGAAAGAATGGTAGCTCCAAGCTTGATGATTGGGTTCTGTGCCGAATTTACAAGAAGAACTCGAGCGCGCAGAAGAATATGCTTTCAGGCGTTTCGAGCAAAGAATACAGTTACAGCAACGGGTCTTCTCCGTCGTCATCGTCCCACTTGGACGACATGCTCGAATCATTGCCCGAGATAGAGGACCGAAGCTTCACCTTGCCGCATTTGAACTCGCTCAAGGCGCTACCGCAAGACGAGAAGCTAAATTTCAATAATCTCGGCGCCGGAAATCTTGTGGACTGGGCTAACCCGGCGGTAGTTAACTCAGTACCCGACTTCGTTCCCGGAAGTCAGGCTCAGGGGATGGGGAATTACAACCCGGGAAATGACCTCTATGTCCCTTCCATCTCTCAGGTCTGCCACACGGGATTGACGGCGCCGGCGCCGGCGCCGGTGGAGAAGCTTGGGAAAACATTTGAGAATTCTGGCGGATACTTTCATCAGCCGAATGCGAATGTGGGATTCTCGAACTCCATGAACCCGTATGGAATCAGATATCCGATGGGGTTCGGATCTCAACAATGA 1197 0.4979 MVELIALAAQIMGNSPFVLDEYMHCTAVNGFSPSDKYGKDDRTYLGKKYPQEFKLLLRFSSLCVCVRMGVPATDTLAQLSLPPGFRFYPTDEELLVQYLCRKVAGHNFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLLENSRKNGSSKLDDWVLCRIYKKNSSAQKNMLSGVSSKEYSYSNGSSPSSSSHLDDMLESLPEIEDRSFTLPHLNSLKALPQDEKLNFNNLGAGNLVDWANPAVVNSVPDFVPGSQAQGMGNYNPGNDLYVPSISQVCHTGLTAPAPAPVEKLGKTFENSGGYFHQPNANVGFSNSMNPYGIRYPMGFGSQQ 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0795 398 MobiDBLite consensus disorder prediction 243 262 - -
Lele31g0795 398 FunFam NAC domain-containing protein 72-like 90 234 - -
Lele31g0795 398 Pfam No apical meristem (NAM) protein 82 206 IPR003441 GO:0003677|GO:0006355
Lele31g0795 398 ProSiteProfiles NAC domain profile. 81 229 IPR003441 GO:0003677|GO:0006355
Lele31g0795 398 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 80 264 - -
Lele31g0795 398 SUPERFAMILY NAC domain 76 229 IPR036093 GO:0003677|GO:0006355
Lele31g0795 398 Gene3D NAC domain 90 235 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0795 Lele-ChrLele31 15634965 15636524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0795 68 330 NAC Transcription Factor Family AT4G27410 65.480 3.31e-122 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele31g0795 NAM 1.6e-36 No_clan